Lutra lutra (Eurasian river otter): 125104223
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Entry
125104223 CDS
T08100
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125104223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125104223
03400 DNA repair and recombination proteins [BR:
llv03400
]
125104223
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125104223
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125104223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
125104223
NCBI-ProteinID:
XP_047592676
LinkDB
All DBs
Position
1:131183424..131247077
Genome browser
AA seq
1513 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALEIKENDRSLYIC
DPFSGIVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDVNMEDFKCPIFLGCIICVTGLCSLDRKAVQQLTIKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVDKGFCQDESIYKTEPRSETKTVPDTSTPT
GQINTVDSRTLSDVSHISNINASCINESMCNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYMLPEEPYIHANYQPVEIPVSDQPESKTALLKRNNSLSKKNLAPD
EKHEQADEDLLSQYINNIPTVVEAVKSEVEPFNDSTHISLPEENQSSVTCCLPDTSTITE
EGLFSQKSFLVLGFSNENESNIANIIRENAGKIVSLQSRIVADYAVVPLLGCEVEATVGE
VVTNTWLVTCIDFQTLIDPKSNPLFMPVPVMAGMTPLEDCVISFSQCAGAEKDSLTFLAN
RLGASVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTISWLLETARMGK
RADESHFLIEKSAKEEQSVETETTNRVNLNSDTPEHPVAHLETHRKTAVTPLDMNRFQSK
AFHAVISQHTRQVSASPPVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKDAQSKKEEAPKPLHKVV
VCVSKKLSKKQGELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVHIV
SEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLSNSRLLSVDSATKDDEPDHL
PVEENDIDSVATSNKESAISNGGGRSDSKGALTQTLEMRENFQKQLQEIMSATSIVKPQG
QRASLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIWDDPT
AREERARLASSLQWPSCPTQYSELQVDIKKLEDSPSQEALRDSEIAEQAVCDPGNMCVTE
APKPPISEELETPVKDSHLIPTPQAPSIAFPLANPPVAPHPREQIITIEETHEDLKKQYI
FQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLASVAAGKWVL
HRSYLEACRTAGHFVPEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKLQQRQESGI
VEGAFSGWKVILYVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFNKLKPDDS
GVNIAEAAAQNVYCLKTEYIADYLMQESPPRVENYCLPEAISFLPNNKEPGPGLSQKRKA
PTEKNKMKRPRVN
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgtttcttgtgaagtttttaaagtcttcagacaattcc
gaatgtttttttaaagcacttgagtcaataaaagagttccaatcagaagaatatcttcag
atcattacagaagaagaggcattggagataaaggaaaatgacaggtcgctttatatctgt
gacccttttagtggcattgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagctgaacatcca
gtttataatatggttatgtctgatgtaactgtatcttgtacaagcctggagaaagataaa
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatatagagaccttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctgaagaaacctattttgcttccttcttggattaaaacactttgggaaaagtcacaa
gagaaaaaaatagctaggtatactgatgtaaacatggaagacttcaagtgtcccattttt
cttggttgcattatctgtgtgactggcctgtgtagcttagacagaaaggcagttcagcaa
ctcacaattaagcatggaggtcaatacatgggacaactgaaaatgaatgaatgcacacac
ctcattgtgcaagaaccaaaaggtcaaaagtatgaatgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggatgaatcc
atatacaagacagagccaagatcagaaacaaagactgtgcctgatacttcaactcctact
ggccagatcaacacagttgatagtcgtactctttcagatgtcagccatatttccaacatc
aatgcaagttgtataaatgaatcgatgtgtaattcagttcttaatagcaaagtggagcct
acacttgaaaatctggaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgtcggatctatctttgtggttttagtggcagaaagcttgataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
atcgtgggagattatgatgatgaattgaagcagttttgggataaatcagcccacaggcct
catgtagtaggagcaaaatggttgctagagtgttttagtaaaggttacatgcttcctgaa
gagccatatatccatgctaactaccagccagtggaaattccagtttcagatcagcctgag
agtaaaacagcccttttaaaaaggaacaacagcttgtctaagaaaaacttggctcctgat
gaaaagcatgaacaagctgatgaagatctgctctctcagtatataaataatatcccaaca
gtagttgaagctgtgaagtctgaagttgagccctttaatgactctactcatatttctctg
ccagaagaaaaccagtcttctgtcacttgttgcctccctgacacttctacaattaccgaa
gaaggtttatttagccaaaagagtttccttgttttgggctttagtaatgaaaatgaatct
aatattgcaaatatcataagagaaaatgctggaaaaatcgtgtcccttcagagcagaatt
gttgctgattacgctgtggttcctctgctggggtgtgaagtagaagcaactgtgggagaa
gttgtcacaaatacgtggctggtaacctgtatagactttcagactttaattgatccaaag
tcaaatcctctcttcatgccagtccccgtgatggcaggaatgactcctttagaggattgt
gttatttcattcagccagtgtgcaggagcagaaaaagattcgttgacattcttagcaaat
cgccttggagcaagtgttcaagaattctttgttcgcaaatccaatgcaaagaaaggcatg
tttgccagtacacatcttgtattgaaagaaccaggtggttctaaatatgaagctgccaag
aagtggaatttaccagcagtcaccatatcttggctgttagagactgctagaatgggaaag
agagcagatgaaagccattttctgattgaaaagtctgctaaagaagaacaaagtgtggaa
actgaaacaacaaacagggtgaatctaaactcagatactccagagcatcctgttgcacac
ctggaaactcataggaaaacagccgtcacgcctttagatatgaaccgctttcagagtaaa
gctttccatgctgtgatctcacaacacaccagacaggtttcggcctccccaccagtggga
caaccacttcagaaagagccctccttacatctggatacaccatcaaaatttctgtccaag
gacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagccttggaaactcca
ggaggtcctagccagcagaaaaggaaactgagtacgccactttcagaagtcattgtcaga
aacttgaaacttgctttggcaaatagctctcgaaatgctgttgctttgtctgccagccct
cagctgaaggatgcccaatcgaagaaggaagaagcccccaaaccacttcacaaggtagtg
gtatgtgtgagtaagaaactcagtaagaaacagggtgaactgaatgggattgcagcctct
ctaggagcagattacagatggagttttgatgaaacagtgactcatttcatttatcaaggc
cgaccaaatgacactaaccgagagtataaatctgtaaaagaaagaggagtacacattgtt
tcagagcactggcttttagaatgtgcgcaagagtataaacaccttcctgaatctctttat
ccacatacttacaatcccaaaatgagcttggatatcagtacagtgcaagatggcagactc
tctaatagtcgactactctcagtggattcagcaacaaaggatgatgagccagatcatttg
cctgtagaagaaaacgatatagacagtgtggccaccagtaacaaagaatcagcaatatca
aatggcggtggaaggagtgactctaaaggagctctgacacagaccttggaaatgagagag
aactttcaaaagcagctgcaggagataatgtctgcaacatcaatagtgaaaccccaaggg
cagagggcttctctttcaagaagtggttgtaacagtgcttcttcaacccctgatagcact
cgctctgcccgcagtgggcgaagtagagtcctggaagcactgaggcagtcacgtcaaaca
gtacctgatgtcaacacagagccctcccagaatgagcagatcatttgggatgacccgaca
gccagggaggagagagcaagacttgccagcagtcttcagtggcctagttgtcctacacag
tattcagagcttcaggttgacattaaaaaattggaggactctccttcccaggaggcttta
cgtgactcagaaattgctgaacaggctgtctgtgatcctggaaacatgtgtgtgactgaa
gctccaaaacccccgatctctgaagaactggaaacaccggtaaaagacagccacctgatc
cctacacctcaagcgcccagtattgccttccccctcgccaacccaccagtggctccacac
cctagagagcagattataacaatagaagaaacacatgaagatttaaaaaaacagtatata
tttcagctgtcatctctgaatcctcaagagcgtattgattattgtcacctgattgaaaaa
ctaggtggtttagtaatagagaaacagtgctttgatcccaattgtacacacattgttgtg
ggacatccacttcgaaacgagaagtatttagcctcagtggcagctgggaaatgggtgctt
catcgctcctatctggaagcatgccggactgctggacacttcgtaccggaagaagactat
gaatggggaagtagttccatacttgatgttttgactggaatcaacgttcaacaacgaaga
ctagcacttgcagcaatgagatggaggaagaaactccagcaaagacaagaatcgggcatt
gttgagggggcatttagtgggtggaaggttatcttatatgttgaccaatcccgagaagca
ggattcaaacgccttcttcagtcaggaggagcaaaggtactgcctggtcattctgtacct
ttatttaaagaagccacacatctcttttctgacttcaataaactgaaaccagatgactca
ggggttaatatagcagaagctgccgcccaaaatgtgtactgcttgaaaacagagtacatt
gctgattatttgatgcaggaatcccctcctcgagtagaaaattactgtctcccagaagca
atttcgtttcttccaaataataaggaacctgggcctggattatcacagaagaggaaagct
cctacagagaaaaataaaatgaaacgacctagagtaaactaa
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integrated database retrieval system
