Lutra lutra (Eurasian river otter): 125104315
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Entry
125104315 CDS
T08100
Name
(RefSeq) DDB1- and CUL4-associated factor 11 isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125104315
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125104315
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
PmrD
Motif
Other DBs
NCBI-GeneID:
125104315
NCBI-ProteinID:
XP_047592862
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All DBs
Position
7:74480212..74488179
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AA seq
582 aa
AA seq
DB search
MTKEARDGGAVGRCCGLRRCKQGLAPLRVLRPLLAGPNDAVTRRWDHGTAAVQELGPETP
PRACPEEGLAYVGARKKKRRMKMWIWPRGQVRLVQGGGAANLQLIQALSDSEEEHDSAWD
GRLGDRYNPPVDATPDTRELECNEIKTQVELATGQLGLRRAAQEHSFPQMLHQRERGLCH
RGSFSLGERSRMMSHFLPNDLGFTDTYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYG
RFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDER
RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILF
SGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDI
RRFSSREGMEASRQAATQQNWDYRWQQVPKKAWRKLKLPGDSSLMTYRGHGVLHTLIRCR
FSPTHSTGQRFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPFEEKIVSSSWD
GNLRLWQYRQVEYFQDDLPEAEELPGAPAPVPHPSTAFSSPQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggaggcgcgtgacggaggagcggttggccggtgctgcggcctccgtcggtgt
aaacaaggcctcgcgccgctgcgggtcctgcgaccgctcctggctggacctaatgatgct
gtgaccagaagatgggatcacggaacagcagcagtgcaggaactgggtccggagacccct
ccgagggcttgccccgaagaggggctagcctacgtcggagcgaggaagaagaagaggagg
atgaagatgtggatctggcccagaggccaagtgaggttggtgcagggcggtggtgcagca
aatttacagctcatccaggccctctcggactcggaggaagagcatgacagtgcttgggat
ggtcgtcttggggaccgatacaacccacctgtggatgcaacccctgacacccgggagctg
gagtgcaatgagatcaagacccaagtggagttggccacagggcagctggggcttaggcgg
gcagcccaggagcacagctttcctcagatgctgcaccagagagaacggggcctctgccac
cggggaagcttctcccttggagaacggtctcgaatgatgtctcacttcctacccaatgat
ttgggctttactgatacctactctcagaaggctttctgcggcatctacagcaaagatggt
cagatcttcatgtctgcttgccaagaccaaacaatccgactgtatgactgccggtatggc
cgcttccataaattcaagagcatcaaggcccgggacgtaggctggagcgtcttggatgtg
gccttcacccctgatgggaaccacttcctatactccagttggtctgattacattcatatc
tgcaacatctacggggagggagacacacacactgccctggacctaaggccagatgagcgt
cgctttgcagtcttttccattgccgtctcctccgatggacgggaagtcctaggaggggcc
aatgatggctgcctctatgtctttgatcgagaacagaaccggcgcacccttcagattgag
tcccatgaggatgatgtgaatgcagtggcctttgctgacataagctcccagatcttgttc
tctgggggcgatgatgccatctgcaaagtgtgggatcgacgcaccatgcgggaggatgac
cccaagcctgtgggtgcactggctggacaccaggatggcatcaccttcattgacagcaag
ggtgatgcccgctatctcatctccaactccaaagaccagaccatcaagctctgggacatc
cgacgcttttctagtcgggaaggcatggaggcctcgcggcaggctgccacacagcaaaac
tgggactaccgctggcagcaggtacccaaaaaagcctggaggaaactgaagctcccaggg
gacagctccttgatgacctaccggggccacggggtgcttcacaccctcatccgctgccga
ttctcccccacccatagcaccgggcagcggttcatctacagcggctgctcgactggcaaa
gtggtcgtgtacgacctccttagcggccacatcgtgaagaagctgaccaaccacaaggcc
tgtgtgcgtgacgtcagttggcacccctttgaggaaaagatcgtcagcagttcgtgggac
gggaacctgcgtctatggcagtaccgccaggttgagtacttccaggacgacctgccagag
gctgaggaactgcccggcgcccctgcccccgtgccccacccctctacggccttttcctca
ccccagtag
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