Lutra lutra (Eurasian river otter): 125104322
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Entry
125104322 CDS
T08100
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125104322
Cilium and associated proteins [BR:
llv03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125104322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_3
TPR_11
AAA_16
KAP_NTPase
NACHT
AAA_22
DUF2225
AAA_19
AAA_14
T2SSE
Viral_helicase1
TPR-S
FliD_C
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
125104322
NCBI-ProteinID:
XP_047592886
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All DBs
Position
1:132102137..132159274
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AA seq
1333 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAAAAAAGAGPGS
LPRGAGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKL
DTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETK
ENEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAAGTQCEYWTGGALGS
EPSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNA
VRCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHSIYFPIDIENQYLAIRKWEIEK
SSLVILFIHLTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSDSVQQLIDQVSNLN
KTNKAKIIDHSGDPTEGVYKTYIYVEKIIKQDILGFENTDPETKDLGSEDSVPEEDDFGD
VLWDIHDEQEQMETFQQATNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLL
LSKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKL
LEEFPRWLEKLSARHQGSIIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPP
AWRLWPTLHLDPLNPKDAKSLIIAECHSVDIKLSKEQEKKLERHCRSATTCNALYVTVFG
KMIACAGRAGNLDKILHQCFQCQDTISLYRLALRSFQESMANDMDKELMKQILCLINVSH
NGVSESELMELYPELSWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYMDDPA
IISSCRQKLINYFTMQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRG
HFAELLSYWQFVGKDKSAMAAEYFDSLKQYEKNCEGEENMICLADLYETLGRFLKDLGLL
SQAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAY
GVEHPHIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQ
LEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLN
NLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPL
YELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHIEALPLYERALKIYEDSLGRMHPR
VGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTH
SPNIFLQGQRTLK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctcgtcgctcgtgagccccgcgggcggggaggtgatcgaggacacttat
ggggcgggcggcggcgaggcctgcgagattccggtagaggtgaagcccaaggcccgcctg
ctgcgcagctcgttccgccgtggcgcggcagcagcggcggcgggggcagggcccgggtcg
ctgccccgcggggcgggtggcggcgggctgctgggggctagctttaagtctaccggctcg
tcggtgcccgagctggaatacgcagcggctgagtacgagcggctgaagaaggaatacgag
atcttccgggtcagcaagaatcaagagttgttgtccatgggccgccgcgaggccaagcta
gacacggagaacaagcgcctgcgggccgagctgcaggcccttcaaaaaacttaccaaaaa
atacttcgggaaaaggaaagtgctttagaagcaaaataccaagcgatggagagggcagca
acatttgaacatgacagagacaaagtgaaaaggcaattcaagatttttagggagaccaag
gaaaatgaaattcaggacttactgagagctaagcgagagttggaaagcaaacttcagagg
ctccaggcacaggggatccaagtatttgatcctggagaatctgattcagatgacaactgt
acagatgttactgctgctggaacccagtgtgaatattggactggaggagccttgggaagt
gaaccttccatagggagtatgatccagcttcagcagtccttcaggggccctgagtttgcc
catagttctatagatgtggagggaccctttgcaaatgtcaacagagatgactgggatatt
gctgtagctagtttattacaagttactcccttgttttcacactccctctggagtaacgct
gtcagatgttacctcatttatacagatgaaacccagcctgaaatggatcttttccttaag
gactattcacctaaacttaaaagaatgtgtgagacaatgggatattttttccattctata
tattttccaatagatattgaaaatcaataccttgctataagaaaatgggaaattgagaag
agttcattagttattttatttattcatttaactttaccaagccttttactggaagactgt
gaagaagcttttctgaaaaaccctgaaggcaaaccacgattaatttatcatcgcttggag
gatgggaaagtcagttccgactccgtccagcaattgattgatcaagtttctaacctgaac
aagaccaacaaagccaagatcattgatcactctggagatcctacagaaggagtatataaa
acttatatttatgtggaaaagattattaaacaggacatcctgggctttgagaacacagac
ccggagactaaggatttgggcagtgaagattctgttccagaagaagatgattttggtgat
gttctgtgggacatacatgacgaacaagagcaaatggaaactttccaacaggctacaaat
tcagcccatgagctgggattcgagaaatattaccagcgccttaacgatctagtggcggca
ccagcaccaattccaccccttcttgtatctggaggaccaggttccggaaagtcccttctc
ttatcaaagtggattcagttacaacagaagaattcccctaacacgctaattctttctcat
tttgtgggaaggcccatgtcaaccagctctgagtcctccttgattattaaacgactaact
ctaaagttgatgcaacactcttggtcagtatctgctctaacactggatccagctaagctt
ctggaagaatttccacgctggctggaaaaactctctgcccgtcatcaaggcagcatcatc
atcattattgattccatagatcaagttcagcaagttgaaaaacacatgaaatggctaatc
gatccactgccagtgaatgtaagagtaattgtttctgtgaacgtagagacatgccctcca
gcctggaggttatggcctacacttcatcttgatcctttaaatcccaaagatgcaaaatct
cttataattgcagaatgccactctgtggacattaaattgagtaaagagcaggagaagaag
ttagaacgacactgtcgttctgctacgacctgcaatgccctttatgtcaccgttttcggc
aaaatgatcgcatgtgctggaagagcaggcaatttagataaaatccttcatcagtgtttc
cagtgtcaagatactatttcattatatagacttgctctgcgatctttccaggagtccatg
gcaaatgatatggataaagaactaatgaaacagattctctgcctcataaatgttagtcac
aatggcgtgagtgaatcagaactgatggaactctaccctgagctttcctgggctgtcttg
acctcccttattcacagtttacacaaaatgtgcttattgacttatggttgtggcttgctc
aagtttcaacatctacaggcttgggaaacagtaagactggaatacatggacgatccagcc
attatttcttcatgtaggcaaaagctaatcaactatttcaccatgcagctaagtcaggac
cgagtgacctggagaagtgcagatgagctcccttggctttttcagcagcagggaagtaaa
cagaagttgcatgattgccttctcaatctctttgtgtctcaaaatctttataaaagagga
cactttgccgagttgctgagttactggcagtttgttggcaaagacaaaagcgcaatggca
gcagaatactttgattcattgaagcagtatgagaaaaactgtgaaggcgaggagaacatg
atttgcttggctgatctttatgaaaccctggggcgatttctcaaggatctaggcctcctc
agtcaggctgtggtgcctttgcagaggtctctagaaattcgagaaacagctttagatcca
gatcacccaagagtagctcagtccctccaccaactagcaagtgtgtacgtgcagtggaag
aagtttggcaatgcggaacagctgtataaacaggccttagaaatctctgaaaatgcgtat
ggtgtggaacatccccatattgctcgtgaacttgaggcactggcaactttgtaccagaaa
caaaataagtatgaacaagctgaacattttaggaaaaaatcctttaaaattcgtcagaag
gctacaaggagaaaaggcaacttgtatggatttgccctcttacgtagacgagccctgcag
ttagaagagctcacgttaggaaaggacacacctgacaatgcccggaccctcaatgagctg
ggcgttctctactaccttcagaataacctggaaacagctgaccagtttctgaagcggtcc
ttagaaatgagagagcgagtcctaggaccagatcaccccgactgtgcccagtctttaaat
aatctggcagctctatgcaatgaaaagaaacagtatgataaagcagaagaactttatgaa
agagctttagacattcggagacgagcactagctcctgatcacccttctttggcctataca
gtgaagcatcttgcaatcttgtataagaaaatggggaaacttgacaaagctgtacctttg
tatgagctggctgttgaaattcggcagaaatcctttggcccaaagcaccccagtgtagct
actgccctggtgaacttagctgttctctatagccaaatgaaaaaacacatcgaagccttg
ccattatatgaaagagcattaaagatttatgaagacagcctgggtcggatgcatcctcga
gttggagaaacattaaaaaatttagccgtgcttagctatgaagaaggggattttgaaaaa
gctgctgaattatacaaaagggcgatggaaataaaagaagcagaaacgtcacttttgggt
ggaaaagctccttcccgacactcctcaagtggagacacatttagcttaaaaacaacccat
tctcctaatattttccttcaaggacagagaaccctaaaatga
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