Lutra lutra (Eurasian river otter): 125105004
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Entry
125105004 CDS
T08100
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125105004
Transcription factors [BR:
llv03000
]
Eukaryotic type
Other basic domains
RF-X
125105004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
AadA_C
Cdc6_C
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
125105004
NCBI-ProteinID:
XP_047593955
LinkDB
All DBs
Position
7:complement(37405970..37549211)
Genome browser
AA seq
1727 aa
AA seq
DB search
MLINCTFPDLKMPGKKPQIPFPRQILYFVSPPPPHASSLSLASTSPTFSCFLLHQLHQSP
PRPRRRAFRVELARARPAHPCAPLPAPRARARNPHTLVHAPPPSAPGGAVGVLPSALGRS
AAARTRLPPGLAGQRRPRWRRGRERAAAAAAWGVAWSRAWGCSSEGPGRRKPRRARKEGR
AAESLSGRSWIWGRLAPPTSSSDVPSSSPPAPAADGRRRRRRRRGAEGRRHASPAVKLPC
GEEPLGLPGDVPQAAGESDSLEPWAAMAEEQQQPPPQQPDAHQQLPPGAPTSGVALPALV
PGLPGTEASALQHKIKNSICKTVQSKVDCILKEVENFTDLEKLYLYLQLPSGLSNGEKSD
QNAVSSSRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIM
KNVFPNMKARRLGTRGKSKYCYSGLRKKAFVHMPTLPNLDFHKTGDGLEGTEPSGQLQNI
DEEVISSACRLVCEWAQKVLSQPFDTVLELARFLVKSHYIGTKSMAALTVMAAAPPGIKG
ITQPSAFIPTAESNSFQPQVKTLPSPIDAKQQLQRKIQKKQQEQKLQSPLPGESSGKKPE
GATTNGVTNLSNGNPAILSPQPIGIVVAAVPSPIPVQRTRQLVTSPSPMSSSDGKVLPLN
VQVVTQHMQSVKQAPKTPQNVPASPGGDRSARHRYPQILPKPANTSALTIRSPTTVLFTS
SPIKTAVVPTSHMSSLNVVKMTAISLTPSNSSAPLKHSASVNSATGTTEESRTIPQIKNG
SVVSLQSPGSRTSSSSGGASAVEVKMEPEAPSDEHSGQCQENSEGTKAPKTAAGALLGQK
SNTDGVVQKPSNEGVLEVKATKVCDQRTKCKSRCSETLPGTSTGNNPSTVALSVATQNLT
FTSTTSPANGDSINKDPKLCTKSPRKRLSSALQESQVPPIKKPIVEQLSAVIIEGQKPGS
VEKDQKVPHSGKIESSTAGAQIPSKVSINVNSHIVANRPLNSSALIASDSASEQQTPSSS
PDIKVKLEGNVFLLDSDSKPDGSFNSNGWQQVSKDSEFISAGCEQQQDISVMTIPEHSDI
NDLEKSVWELEGMPQDTYTQQLHSQIQESSLNQIQAQSSDQLPLQSELKEFEPSVSQTNE
SYFPFDDELTQDSIVEELVLMEQQISMNNSHSYGNCLGMSLQSQSVTPGAPMSSHASSTH
FYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPVDSA
LGSSRHTPIGTPHSNCSSSVPPSPVECRNPFAFTPISSSMAYHDASIISSSPVKPMQRPM
ATHPDKTKLEWMNNGYSGVSNSSVSGHGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRH
HDTHFGRLTPVSPVQHQGATVNNTNKQEGFAVPAPLDNKGTNSSASSNFRCRSVSPAVHR
QRNLSGSTLYPVSNIPRSNVTPFGSPVTPEVHVFTNVHTDACANNIAQRSQSVPLTVMMQ
TAFPNALQKQTNSKKITNVLLSKLDSDNDDAVRGLGMNNLPSNYTARMNLTQILETSTVF
PSANPQNMIDSSTSVYEFQTPSYLTKSNSTDQISFSPGDNQAQSEIGEQQLDFNSTVKDL
LSGDGLQTNQQLVGQVASDLTNTTSDFSSDIRLSSELSGSINDLNTLDPNLLFDPGRQQG
QDDEATLEELKNDPLFQQICSESMSSMTSSGFEWIESKDHPTVEMLG
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaattgcacttttcctgacttgaagatgccaggaaaaaaaccccaaatccca
tttccacgccaaatattatattttgtttctcctcctcctcctcacgcaagttctctttct
ctcgccagcacctcccccacgttttcctgctttctcctccaccagctccaccagtcccct
cctcggccccggcggcgcgcgttccgggtcgagctggcccgcgcccgccctgcgcacccg
tgcgcccccctcccggccccccgcgcccgcgcccgtaacccgcacacgctggtccacgcc
ccccccccctccgcccccggcggagcggtaggtgttttgccgtctgcgctgggccgcagt
gcggctgcgcgcactaggctgcctcccgggctggcagggcagcggcggccgcggtggcgg
cggggccgggagcgagcggcggcggcggcggcgtggggagtggcgtggagccgagcctgg
ggctgcagcagcgagggccccgggcgtagaaagcctcggagggcaagaaaggaaggccgg
gccgcggagtcactgagcggccgttcttggatttgggggagacttgccccccccacctcg
tcttcagacgtcccctcctcatcccccccagccccggccgctgacgggaggaggcggcgg
cggcggcggcggggggctgaggggcgccgccatgcctctcccgcggtgaagcttccctgc
ggtgaggagccgctcggtctccccggtgatgtcccccaggcggcaggcgaaagcgactca
ctcgagccctgggcagcgatggcagaggaacaacaacagccgccaccacagcagcctgat
gcccatcagcagcttccccccggcgcccccacctcgggggtggctctgccagcccttgtg
cctgggctgccagggacagaggccagcgcgctgcaacacaagatcaagaactccatctgc
aaaactgtacaatctaaagtggactgcattttgaaagaagttgagaattttacagaccta
gagaaactctacctctaccttcagctgccttctggtctcagcaatggagagaaaagtgat
cagaatgccgtgtcatctagtcgggcacagcaaatgcatgccttttcttggattcgaaat
acgctagaagaacatcctgagacttcattgcccaaacaagaagtctatgatgagtacaag
agctattgtgacaatcttggttaccatccattaagtgctgctgactttggaaagatcatg
aaaaatgtctttccaaacatgaaggcacgtcgtctgggcacaagaggcaaatctaaatat
tgctatagtggactaaggaaaaaagcctttgttcatatgccaacactgcccaatcttgat
tttcacaaaactggagatgggttggaaggaactgaaccttctgggcagcttcaaaatatt
gatgaggaagttatctcttctgcttgccgtcttgtgtgtgaatgggcccagaaagtgtta
agccagccgtttgacacagtcttggaattagcccgcttccttgtaaaaagtcattatata
ggtaccaagtcgatggcagctctaacggtaatggcagcagcaccaccaggaattaaagga
attactcagccgtctgcttttatacctacagctgagagtaattcttttcagcctcaagtg
aagactttgccttctcctattgatgctaaacagcaattgcaacggaaaattcagaagaag
cagcaagaacagaaactacagtcccctttgccaggagaatcctcaggcaaaaaaccagaa
ggcgctaccaccaatggagtaactaatctttctaatggaaatcctgcaatcctttctcct
cagcctattggtatcgttgtggcagctgtccctagtcccattccggtccagagaaccagg
cagttggtaacttcaccaagtccaatgagttcttctgatggcaaagttcttcccctcaat
gtacaagtggtcactcagcacatgcagtctgtgaaacaggcaccaaagactcctcagaac
gttccagccagtcctggtggggatcgttctgcccggcaccgctaccctcagatcttaccc
aaaccagccaacaccagtgcactcaccattcgctccccaactactgtcctctttactagc
agtcccatcaaaactgctgttgtacccacttcacacatgagttctctaaatgtggtgaaa
atgacagcaatatccctcacacccagcaacagtagtgcccctcttaaacattctgcctca
gtaaacagtgctacaggaacaacagaagaatcaaggaccattccacagatcaagaatggt
tctgttgtttcgcttcagtcaccagggtccaggaccagcagcagcagcgggggagcatct
gccgtggaagtcaaaatggaacctgaagcaccatcagatgagcattctggacagtgccaa
gagaattctgaggggactaaagctcccaaaacagcagctggtgcccttctgggacagaaa
agtaatacagatggagtagtgcaaaaaccttcaaatgaaggtgtccttgaagtaaaagca
actaaggtctgtgaccagaggaccaaatgtaaaagtcgctgtagtgaaactctgccaggc
acttcaacaggcaataatccaagcactgtcgccctctcagttgccactcagaacttaact
ttcaccagcaccacctcaccagctaatggtgactcaataaataaagaccctaaattatgc
actaaaagtccaagaaagcgactgtcttctgcattgcaagagtcccaggtgcctcccata
aagaaaccaattgtggaacagctttctgcagttatcatagaaggtcagaaaccaggcagt
gttgagaaggaccaaaaggttccacattcagggaaaatagaaagttcaacagccggtgct
cagattcctagcaaggtatcaataaatgtcaactcacacatagtggcaaatcgacccttg
aattcttctgctctcattgccagtgattcagcttcagaacagcaaacaccatcatcatct
ccagatataaaagtaaaacttgaagggaatgtttttcttttggacagtgattcgaaacca
gatggcagctttaattcaaatggatggcaacaggtcagtaaggattctgagtttatatct
gccggctgtgaacaacagcaagatatcagtgttatgacaattcctgagcactctgatatc
aatgacttagagaaatctgtttgggaattagaaggaatgccacaggacacatatacccag
cagctgcatagccagatacaagaatcttctttgaatcaaatacaagcacagtcttcagat
cagttacctctacagtctgaactgaaagagtttgagccttctgtttcccaaacaaatgaa
agctactttccttttgatgatgagcttacacaagatagtattgtggaagagctggtgctt
atggagcagcaaatatcaatgaacaattctcattcttacggtaactgtttgggaatgagc
cttcagagtcagtctgtaaccccaggagctccaatgtcatctcatgcctctagtacccac
ttctatcatccaatccatagcaatggcactccaatccacacacccacacccactcctacc
ccaaccccaaccccgaccccgaccccaaccccaacgtcagaaatgattgctggctctcag
agtctgtcacgggagagcccttgctccaggctagcccagaccacacctgtggatagtgct
ttaggaagtagccgacacacacccatcggtactccacattctaactgcagcagtagtgtc
cctcccagccctgttgaatgcaggaatccatttgcgtttaccccaataagctccagtatg
gcgtaccatgatgccagcattatctcaagtagtcctgtgaaaccgatgcaaagacccatg
gccacacaccctgacaaaaccaaacttgaatggatgaataatgggtatagtggggttagt
aattcatcggtttctggccatggcattctcccaagctatcaggaactagtggaagaccgt
ttcaggaaacctcatgcttttgctgtgcctggacagtcttaccagtctcaatccagacat
catgacactcatttcggtcgtttgactcctgtgtctcctgtgcagcatcaaggtgccact
gtaaataacaccaacaaacaggagggttttgcagttcctgcccctctggataataaagga
actaactcatctgccagcagcaacttcagatgccggagtgtgagccctgctgttcatcgc
caacgtaatcttagtggaagcaccctgtatccagtatctaatatcccccgatctaatgtg
accccctttggaagtccggtaaccccagaagttcacgttttcacaaatgttcacacagat
gcatgtgccaacaacatagctcaaagaagtcagtcagttccattgacagtcatgatgcag
acagccttcccaaatgctcttcagaagcaaacaaacagtaaaaaaataaccaacgttttg
ttaagtaaacttgattctgacaatgacgatgcagtgagaggtttgggcatgaacaacctg
ccctccaattacacggcccggatgaatctcactcagattttggagacttccactgttttt
cctagtgccaatccgcagaatatgatcgattccagcacttctgtttatgaattccaaaca
ccatcttacctcactaaaagtaatagcaccgatcagatcagtttttctcctggagataat
caagcacaatcagaaatcggagagcaacaattagatttcaatagcactgttaaagacctg
ttgagtggagacggcttgcaaaccaaccagcagctggtaggtcaggtagcatctgatctc
actaatactacgtctgatttctctagtgatatcaggttgtcttctgagctctcaggcagc
atcaatgatttgaacactttagacccaaacctactgtttgatccaggtcgtcagcaggga
caagatgatgaagctacactggaagaattaaagaatgacccattatttcaacaaatttgc
agtgaatccatgagctctatgacttcatcaggttttgagtggatagaaagcaaggaccat
cctactgttgaaatgttgggttaa
DBGET
integrated database retrieval system
