KEGG   Lutra lutra (Eurasian river otter): 125105023
Entry
125105023         CDS       T08100                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03013  Nucleocytoplasmic transport
llv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125105023
   03015 mRNA surveillance pathway
    125105023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125105023
   03041 Spliceosome [BR:llv03041]
    125105023
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125105023
Spliceosome [BR:llv03041]
 Complex C
  Other components
   EJC/TREX
    125105023
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 125105023
NCBI-ProteinID: XP_047593990
LinkDB
Position
7:88318843..88326311
AA seq 751 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAHLQPLP
QSQPEPQLQPEPQPQLQPEPQPPSQPQPQPQPPAQSQPPAQPQPQALLQAQPLSQPETLP
LAVLQPSIQVFQEQGHLLPERKEFPVESVKLTEVTVEPVLTVHSESKTKTKTRSRSRGRA
RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTT
SSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSD
RKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcggtcgcggtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatattcgcaagctcaccggacgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttattgatgggtactttgcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaagttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagtggaaagtgtagaaccttcagaaaacgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcccgtgaaagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagaaagaatctgagccccagcctgagcctgtggctcacctccagcccctgcct
cagtctcagcctgagcctcagctgcagcctgagccgcagccacagctgcagcctgagcct
cagccaccgtcccagccccagccccagccccagcccccagcccagtcccagcccccagcc
cagccccagccccaagcactgctccaagcccagcctctctctcaacctgagactttgcca
ttagctgttttacagccatcaattcaggtttttcaggagcaagggcatttgctacctgag
aggaaggaatttcctgtggaatctgtaaaactcactgaggtgacagtagagccagtctta
acagtacattcagagagcaaaaccaaaaccaaaactaggagcagaagtagagggcgagct
agaaataaaaccagcaagagtagaagtcgcagcagtagcagtagtagttctagtagtagt
tccactagtagcagcagtggaagcagttccagcagtggcagcagtagtagtcgcagtagt
tccagtagcagctccagcaccagtggcagcagcagcagagacagtagcagcagcaccact
agtagcagtgagagtagaagtcggagtaggggccggggacataacagagatagaaagcac
agaaggagcgtggatcggaagcgaagggatacatcaggactagaaagaagtcacaaatct
tcaaaaggtggtagtagtagagatacaaaaggatcaaaggataagaattcccggtccgac
agaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaaga
gaccgaaaatcagacaggaaagacaaaaggcgttaa

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