Lutra lutra (Eurasian river otter): 125105023
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Entry
125105023 CDS
T08100
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125105023
03015 mRNA surveillance pathway
125105023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125105023
03041 Spliceosome [BR:
llv03041
]
125105023
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125105023
Spliceosome [BR:
llv03041
]
Complex C
Other components
EJC/TREX
125105023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
125105023
NCBI-ProteinID:
XP_047593990
LinkDB
All DBs
Position
7:88318843..88326311
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AA seq
751 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAHLQPLP
QSQPEPQLQPEPQPQLQPEPQPPSQPQPQPQPPAQSQPPAQPQPQALLQAQPLSQPETLP
LAVLQPSIQVFQEQGHLLPERKEFPVESVKLTEVTVEPVLTVHSESKTKTKTRSRSRGRA
RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTT
SSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSD
RKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatattcgcaagctcaccggacgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttattgatgggtactttgcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaagttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagtggaaagtgtagaaccttcagaaaacgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcccgtgaaagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagaaagaatctgagccccagcctgagcctgtggctcacctccagcccctgcct
cagtctcagcctgagcctcagctgcagcctgagccgcagccacagctgcagcctgagcct
cagccaccgtcccagccccagccccagccccagcccccagcccagtcccagcccccagcc
cagccccagccccaagcactgctccaagcccagcctctctctcaacctgagactttgcca
ttagctgttttacagccatcaattcaggtttttcaggagcaagggcatttgctacctgag
aggaaggaatttcctgtggaatctgtaaaactcactgaggtgacagtagagccagtctta
acagtacattcagagagcaaaaccaaaaccaaaactaggagcagaagtagagggcgagct
agaaataaaaccagcaagagtagaagtcgcagcagtagcagtagtagttctagtagtagt
tccactagtagcagcagtggaagcagttccagcagtggcagcagtagtagtcgcagtagt
tccagtagcagctccagcaccagtggcagcagcagcagagacagtagcagcagcaccact
agtagcagtgagagtagaagtcggagtaggggccggggacataacagagatagaaagcac
agaaggagcgtggatcggaagcgaagggatacatcaggactagaaagaagtcacaaatct
tcaaaaggtggtagtagtagagatacaaaaggatcaaaggataagaattcccggtccgac
agaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaaga
gaccgaaaatcagacaggaaagacaaaaggcgttaa
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