Lutra lutra (Eurasian river otter): 125105134
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Entry
125105134 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
llv00535
]
125105134
04091 Lectins [BR:
llv04091
]
125105134
Proteoglycans [BR:
llv00535
]
Cell surface proteoglycans
Others
125105134
Lectins [BR:
llv04091
]
C-Type lectins
Others
125105134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
125105134
NCBI-ProteinID:
XP_047594224
LinkDB
All DBs
Position
7:29792924..29828654
Genome browser
AA seq
2323 aa
AA seq
DB search
MRSGQQPAPPAPALALTLTLAVLARLSSAASFFGENHLEVPTATALTDVDLWLQFSTFQP
EALLLLAAGQADHLLLQLHSGYLEVTLALGQEELRLQTPAGTLLSDSAVHTVQLTVSDSE
ALLSVDGFLNASAPILGAPLEVPYGIFLGGPGSLSLSYLTGASRPLRGCLHAATLNGRNL
LRPLTPGVHEGCAEEFSADDRMALGFSGPHSLAAFLAWSTREEGTLEFILTTRSQQAPLA
FQAGGQHGDFLYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGQPHEVSVHVDAHQLEISV
DQYPTRTSNRGVLSYLDPRGNLLLGGLDAEASRHLQEHRLGLAPGTINISLLGCVEDLSI
NGQRQGLRDALLTRSMTAGCRLEEDEYEEDAYGPYEAFSTLAPEAWPAVELPEPCVPEPG
LPPVFANFTQLLTISPLVVAEGGAAWLEWRHVQPTLDLSEAELRKSQVLFSVSRGARHGE
LELDIPGAQARKMFTLLDVVNRKVRFVHDGSEDTSDQLMLEVSVTARVPVPTCLRRGQTY
ILPIQINPINDPPRIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQLLGTPTG
LPVERRDQPGEPATEFSCRELEAGSLVYVHRSGPAQDLTFRVSDGLQASPAATLKVVAVR
PTVQILHNTGLRLAQGSAAPISSTNLSVETNAVGQDVSVLFRVTEALQFGELQKQGAGGA
EGAEWRATQAFHQRDVEHGRVRYLSTDPQHHTEDTVENLALEVQVGQETLSNLSFPVTIQ
RATVWLLRLEPLHTQNTQQEVLTTAHLEATLEEEAGPSPTTFHYEVVQAPRKGNLRLQGT
RLSEGQSFTQDDLQAGRVTYGATARTSETVEDTFRFRVTAPPHFSPLYTFPVHVGGDPDA
PVLTNILLSVPEGGEGILSADHLFVKSLNSASYLYEVMERPRHGRLVWRGTQDEATMVTS
FTNEDLLQGRLLYQHDNSETTEDDIPFVAMRQGDGSGGMAWEEVRGVFRVAIQPINDHAP
VQTISRIFHVARGGRRLLTTDDVAFSDADSGFADTQLVLTRKDLLFGSIVAVDEPTRPIY
RFTQEDLRKKRVLFVHSGADRGWIQLQVSDGRHQATALLEVQASEPYLRVANVSSLVVPQ
GGQGTIDTAVLQLDTNLDIRSGDEVHYHVTDGPHWGQLLRAGQPATAFSQQDLLDGALLY
SHNGSLSPRDTLAFSVEAGPVHTDATLQVTIALDGPLAPLRLIQHKKIYVFQGEAAEIRK
DQLEAAQEAVAPADIVFSVKTPPRAGYLVLLSPSASAAGSPSLNPVQSFSQEAVDAGRVL
YLHSRPEAWSDAFSLDVSSGLGAPLEGVRVELEVLPAAIPLETHNFSVPEGGTRTLGPPL
IRVLGPYFPTLPGLELQVLEPPRHGALRREEGPQEGTLGAFSWKEVEQQLIHYVHDGSET
LTDSFVLVANASEVDRQSPPVAFTVTILPVNDQPPILTTNTGLKMWEGATVPFPPEALRG
TDSDSGPEDLVYTIEQPSNGRVVLRAAPGTEVHSFTQAQLDGGLVLFSHGGALDGGFRFS
LSDGEHTSSGHFFRVMAQKQLLLSLEGSRTLTVCPGSVQPLSSQSLRASSSEGTDPQHLL
YRVVQGPRLGRLFHAQHGSTRETLANFTQAEVYAGNILYEHEMPPEPFWEVHDTLELQLS
SPPALDVAATLVVSVSFEAACPQRPSRLWRNKGLWVPEGQRAEITTATLDASNLLASIPS
PQRPEHDVLFHITQFPTRGQLLVAEEPLHAGRPHFLQSELAAGQLAYAHGGGGTQQDGFR
FRAHLQGPAGASVSGPQTSEAFTITVRDVNERPPRPQASVPLRLTRGSHAPVSRAQLSVV
DPDSAPGXIEYEVQQAPLNGFLSLVGAGPGPVTRFTQADVDSGRLAFVANGSSVAGILQL
SASDGASPPVPMSLAVDVLPSAIEVQLRAPLEVPQAVGRSPLSRQQLRVVSDQDEPDAAY
RLTRRPRFGQLLVAGQPAASFSQLQVDQGEVVFAFTNFSSSRDHFGILALARGANASATV
NVTVRALLRVGAGGPWPQGATLRLDSTVLDAGELANRTGSVPRFRLLAGPQHGRVVRVPQ
ARTEPSDGQLVEQFTQQDLEDGRLGLEVGKPEGRSPGPMGDSLILELWARGVPPAVATLD
FDTEPYDAARPYSVALLSLPEPAQTEATKPESSTPTGEPGPFASSPVPTVASGGFLGFLE
ANMFSVIIPVCLVLLLLALILPLLFYLRKRNKTGKHDVQVLTAKPRNGLAGDNETFRKVE
PGQAIPLTAVPSQGPPLGGQPDPELLQFCRTPNPALKNGQYWV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaggccagcagcctgcgcctccggcccctgccctggccctgactttgaccttg
gctgtgttagccagactgtcatccgcagcctccttcttcggtgagaaccacctggaggtg
cccacggccacagctctgaccgatgtagacctctggctacaattctccacttttcagccc
gaagccctgcttctcctggcggcaggccaggctgaccacctcctcctgcagctccactct
ggatacctagaggtcacactcgccctgggccaggaggagctaaggctgcagacgccagct
gggaccctgctgagcgactctgccgtccacactgtgcagctgaccgtttcagacagcgag
gccttgctgtccgtcgatgggttcctgaacgcctcagcccccatcctgggagctcccctg
gaggtcccctatgggatcttcctggggggccccgggagccttagcctgtcctacctgacg
ggggctagccggcccctgaggggttgcctccacgctgccaccctcaatggccgcaacctg
ctccgaccactgaccccgggcgtgcatgagggctgcgctgaagagttttctgcggatgac
agaatggccctgggcttctctggaccccactccctggctgccttcctggcctggagcact
cgggaggaaggcaccctggagtttatcctcaccactcggagccagcaggcgcccctggcc
ttccaggcggggggccagcatggggacttcctctacgtggacatctttgagggccacctg
cgggctgtagtggagaagggccagggcacggtactgcttcacaacagcgtgcctgtggcc
gacgggcaaccccatgaggtcagcgtccatgtggacgctcaccagctggagatttccgtg
gaccagtaccccacacggacatccaaccgtggggtcctcagctatctggacccacgtggc
aatctcctccttggggggctggacgctgaggcctctcgccatctccaggaacaccgcctg
ggcctggccccggggaccatcaacatctccctgctgggctgcgtggaggatctcagcatc
aacggccagaggcaggggctccgggacgccttgctgacgcgcagcatgacagccggctgc
aggctggaggaagacgagtatgaggaggacgcctatggcccatacgaagctttctccacg
ctggcacctgaggcttggcccgccgtggagctgcctgagccctgcgtgcctgaaccgggg
ctgccgcctgtctttgccaatttcacccagctgctgaccatcagcccactcgtggtggct
gaggggggtgcagcctggctcgagtggcggcacgtgcagcccacgctggacctgagcgag
gccgagctgcgcaaatcccaggtgctattcagtgtgagccgcggggcacgccacggcgag
ctcgagctggacatcccaggggcccaggcacggaaaatgttcaccctcctggacgtggtg
aaccgcaaggtccgctttgttcacgatggctccgaggacacctccgaccagctgatgctg
gaggtgtccgtgaccgccagggtgcccgtgcccacctgccttcggaggggccaaacctac
atcctgcccatccagataaatcccatcaatgacccaccccgtatcatcttcccacacggc
agcctcatggtgatcctggagcacacacagaagccactggggcctgaagttttccaggct
tacgacccagactccgcctgcgagggcctcaccttccagctccttggcacccccaccggc
ctccccgtggagcgccgagaccagcctggggagccagcaacggagttctcctgccgggag
ctagaggccggcagcctcgtctatgtccaccgaagtggacccgcccaggacctgacattc
cgggtcagcgacgggctgcaggccagccccgccgccaccctgaaggtggtggcagtccgg
ccaacggttcagatactccacaacacggggctgcgcctggcccagggttccgcggcccct
atctcttccaccaacctgtcggtggagaccaatgccgtggggcaggatgtgagcgtcctg
ttccgagtcacagaggccctgcagtttggggagctgcagaagcagggggcaggtggggcg
gagggggccgagtggcgggccacgcaggccttccaccagcgggatgtggagcacggccgt
gtgagatacctgagcactgacccgcagcatcacaccgaggacaccgtggagaacctggcc
ctggaggtgcaggtgggccaggagaccctgagcaatctgtccttcccagtgacaatccag
agagccacggtgtggctgctgcggctggagcccctgcacactcagaatacccagcaggag
gtgctcaccacggcccacctggaggccaccctggaggaagaggcaggccccagccccacc
accttccactatgaggtggtccaggcccccaggaagggcaacctgcggctacagggcaca
cggctgtcagaagggcagagcttcacccaggatgacctgcaggctggccgggtgacctat
ggggccacggcacgcacctcagagacagttgaagacaccttccgcttccgtgtcacagct
ccaccgcacttctccccactctacaccttccccgttcacgttggcggtgacccagacgct
cccgtcctgaccaacatcctcctctcagtgccggagggtggcgagggcattctctccgct
gaccacctctttgtcaagagtctcaacagcgccagctatctctacgaggtcatggagcga
ccccgccatggaaggctggtttggagggggacgcaggacgaggccaccatggtgacgtcc
ttcaccaatgaggacctgctgcagggccggctgctctaccagcatgacaactccgagacc
acagaagacgacattcccttcgtggcaatgcgccagggtgacggcagcgggggcatggcc
tgggaggaggtgcggggcgtcttccgcgtggccatccagcccataaatgaccacgctccc
gtgcagaccatcagccgtatcttccacgtggcccggggtggccggcggctgctgacaaca
gatgacgtggccttcagtgatgccgactccggctttgcagacactcagctggtgctgacc
cgcaaggaccttctctttggcagcatcgtggccgtggatgagcccacacggcccatctac
cgcttcacccaggaggacctcaggaagaagagggtcctatttgtgcactcgggggccgac
cgtggctggatccagctgcaggtatccgacgggcggcaccaggccactgcgctgctcgaa
gtgcaggcctcagagccctacctccgcgtggccaatgtctccagcctcgtggtccctcaa
ggaggccagggcaccatcgacactgccgtgctccagctggacaccaatctcgacatccgc
agtggggatgaggtccactaccatgtcacagacggcccacactgggggcagctgctccgg
gccggccagcctgccacggccttctcccagcaagacctgctggatggggcacttctctac
agccacaatggcagcctcagccctcgagacaccctggccttctccgtggaggcagggccg
gtgcacacagatgccaccttgcaagtgaccattgctctagacgggccactggccccactg
cgtctgatccagcacaaaaagatctacgtcttccagggggaggcggctgagatcagaaag
gatcagctggaggcagcccaggaggcagtggcgcccgcagacatcgtgttctcagtgaag
accccgccgcgggccggctacctggtgttgctgtctcccagtgcctcagcggccgggtcg
cccagcttgaacccagtgcagagcttttcacaggaggcggtagacgctggcagggtcctg
tacctgcactcccgcccggaggcttggagcgatgccttctccctggatgtgtcctcaggc
ctgggtgcacccctggagggtgtccgtgtagagctggaggtgctgcctgctgccatcccg
ctggagacgcacaacttcagcgtccctgagggcggcacccgcaccctgggccctccgctg
atccgcgtgctgggaccttacttccccacactgcctggcctcgagctgcaggtgctggag
ccaccccggcacggggccctgcgcagagaggaaggtcctcaggaggggacccttggagcc
ttctcctggaaagaggtggaacagcagctgatccattatgtgcacgacgggagtgagacg
ctgacagacagcttcgtcctggtggccaatgcctcagaggtggaccgccagagccctcct
gtggccttcaccgtcaccatcctgcccgtcaacgaccagccccccatcctcaccaccaac
acaggcctgaagatgtgggagggggccacggtgcccttccctccggaggcccttaggggc
acagacagcgactcaggaccggaggacctggtctacaccatcgagcagcccagcaacggg
agggtggtgctgcgggcggcaccaggcaccgaggtccacagcttcacccaggcccagctg
gatggcgggctcgtgctgttctctcacggaggagccctggatggcggcttccgcttcagc
ctctctgacggggagcatacctcctctggacacttcttccgcgtgatggcccagaagcag
ctgctcctctccctggagggcagccgaacgctgaccgtgtgcccagggtcggtccaaccg
ctcagcagccagagcctgagagccagctccagtgagggcactgacccccagcacctgctc
taccgggtggtgcaggggccccgactgggccggctgttccacgcccagcacggcagcacc
agggagaccctggcaaacttcacccaagccgaggtgtatgctgggaatattctgtatgaa
cacgagatgcctcctgagcccttctgggaggtccacgacaccctggagctccagctgtca
tcacctcctgccctggatgtggctgccacccttgttgtgtctgtgtccttcgaggctgcc
tgtccccagcgccccagccgcctctggaggaacaaaggtctctgggtccccgaaggccag
cgggccgaaatcaccacggccacccttgatgcctccaacctcctggccagcatcccgtca
ccccagcgcccagagcatgacgtgctcttccacatcacacagttccccacccggggccag
ctgctggtggccgaggagcccctccacgccggccggccccacttcctgcagtccgagctg
gccgcagggcagctggcctatgcccacgggggcgggggcactcagcaggacggcttccgc
ttccgtgcccacctccaggggccagcgggggcctccgtgtcaggaccgcagacctcagag
gcctttaccatcaccgtgcgggatgtgaacgagcggccaccgcggccccaggcgtccgtg
ccactccggctcacccggggctcccacgcgcccgtctcccgggcccagctcagtgtggtg
gacccggactcagcacctgggnagattgagtatgaggtgcagcaggcacccctcaatggt
ttcctgagtctggtgggggccggcccggggccggtgacccgcttcacgcaggccgacgtg
gactctgggcgcctggccttcgtggccaatgggagcagcgtggctggcatcctgcagctg
agcgcatccgacggggccagccctcccgtgcccatgtccctggccgtggacgtcctgcca
tcggccatcgaggtgcaactgcgggcgcccctggaggtgcctcaggctgtggggcgctcc
cccctgagccgacagcagctgcgtgtggtgtcagaccaggacgagccggacgccgcctac
cgcctcacccggcggccccggttcgggcagctgctggtggctgggcagcccgctgcctcc
ttcagccagctccaggtagaccagggggaggtggtcttcgccttcaccaacttctcctcc
tctcgcgaccacttcggcatcctggcgctggcccgaggggccaacgcgtccgccacggtg
aacgtcactgtcagggctctgctgcgtgtgggggctggcgggccatggccccagggggct
accctgcgcttggactccaccgtccttgatgctggagagctggccaaccgcacgggcagt
gtgccccgtttccggctcctggcaggaccccagcatggccgcgtggtacgcgtgccccag
gccaggacggagcccagcgatggccagcttgtggagcaattcacccagcaggaccttgag
gacggaaggctggggctggaagtgggcaagccagagggccggtcccctggccccatgggt
gacagtctcattctggagctgtgggcacggggcgtcccgcccgctgtggccaccctggac
tttgacactgagccttacgatgcggcccgaccctacagcgtggccctgctcagtctcccc
gagcctgctcagaccgaagcaacgaaaccagagagcagcacccccacgggggagccaggc
ccgttcgcctccagccctgtgcccaccgtggccagcgggggcttcctgggcttcctggag
gccaacatgttcagcgtcatcatccccgtgtgtctggtcctcctgctcctggcactcatc
cttcctctgctcttctacctccgcaaacgcaacaagacgggcaagcacgacgtccaggtc
ctgactgccaagccccgcaatggcctagcgggcgacaacgagaccttccgaaaggtagag
ccgggccaagccatcccgctcacagcagtgcccagccaggggcccccactggggggccag
cctgacccagagctgctgcagttctgccggacacccaaccctgctctcaagaacggccag
tactgggtgtga
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integrated database retrieval system
