Lutra lutra (Eurasian river otter): 125105292
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Entry
125105292 CDS
T08100
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
llv00535
]
125105292
00536 Glycosaminoglycan binding proteins [BR:
llv00536
]
125105292
04091 Lectins [BR:
llv04091
]
125105292
Proteoglycans [BR:
llv00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
125105292
Glycosaminoglycan binding proteins [BR:
llv00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125105292
Lectins [BR:
llv04091
]
C-Type lectins
Lecticans
125105292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
I-set
EGF_CA
hEGF
ig
Ig_3
EGF_3
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125105292
NCBI-ProteinID:
XP_047594588
LinkDB
All DBs
Position
7:complement(6445202..6507775)
Genome browser
AA seq
2339 aa
AA seq
DB search
MTTLLLVFVTLRVITAVSSLEASDPDNSLSVSIPEPSPLRVLLGNSLTIPCYFIDPMHPV
TTAPSTAPLAPRIKWSRISKEKEVVLLVATEGQVRVNSAYQDKVSLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSEATVEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPDKFTFQEAADECRRLGARLATTGQLYLAWQGGMDVCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHTNQTGYPDPLSRYDAICYTGEDFVDIPEN
FFGVGGEEDITIQTVTWPDVELPLPGNVTEGEARGNVILTVRPVFGVSPTVPEPEEPFTF
TPEPEEPFTFATVGGATAFPEAENRTGEITGPWGVPATPGPAFTAFTSEDHVVQVTAAPG
TAEVSGRPRLPGGVVFHYRPGSARYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQC
DAGWLQDQTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPASETYDVYCYVDRLEGEVFFIT
RLEQFTFQEALAFCESHNATLASTGQLYAAWSRGLDKCYAGWLSDGSLRYPIVTPRPSCG
GDKPGVRTVYLYPNQTGLPDPQSRHHAFCFRGVSAAPSPGEEEGGTPTPSVVEDWIATRV
GPGVAAVPVGEETTAIPDFTIEPENQTEWEPAYSPAGTSPPPGIPPTWPPTSTATEESTE
APSGTEVPSASVEPSPSEEPSPSEKPSPSEEPSPSEEPSPSEEPSLPWEELSTLSPPVPS
GTELPGSGEVSGVPEVSGDFTGSGEVSGHLDSSAQPSGESASGLPSEDLDASGLTSTVGS
GLLMGSGLASGDEDKIPWSSIPKVGGEGLETSASGVGELSGLPSGEGPEASASGVGDISR
IPSGEGPEVSASGVEDLSRLPSGEGPEVSVSGVEDLSGLPSGEGPEVSASGVEDLSRLPS
GEGPEVSVSGVEDLSGLPSGEGPEVFVSGVEDLSGLPSGEGPEVSASGVEDISRLPSGEG
PEVSVSGVEDLRGLPSGEGPEVSASGVEDLSGLPSGEGLEVLVSGVEDLGGLPSGEGPEV
SASGVEDLSRLPSGEGPEVSASGVEDLSGLPSGEGPEVSASGVEDLGGLPSGEGPEVSAS
GVEDLSRLPSGEGPEVSASGVEDFSGLPSGEGPEVSASGVGDLSGLPSGGEGIETFTSGV
GDLSRLPSGEASASGVGDLSGIPSGEVPEASASGVGDLSGLPSGREGLETSASGVGDLSG
LSSGEGPEASASGIGDLSGLPSGREGLETSASGVEDLSGLPLEGEGLETSVSGTEDLSGL
PSGKEDSIGSASGALDFGRIPSGTVGSGQAPEASGLPSGFSGEYSGMDLGSGPSSGLPDF
SGLPSGFPTVSLVDTTLVEVVTATSASELEGRGTIGISGAGETSGLPFSELDISGAVSGL
PSGAELSGQASGSPDISGETSGFFGVSGQPSGFPDISGGISGLFEVSGQPSGFSGETSGV
TELSGLPSRQPDVSGEASGVLSGSGPPFGITDISGEESGIPDISGQPSGLPEFSVTTSEV
PGLVPGTTSGSGESSGITFVDTSLVEVTPTMFKEEEGLGSVEVSGLPSGEADVSGISGIM
DVSGQSSGAIDSSGLTSQPPEFSGLPSGVAEVSGESSGAETGSSPPSGAYDSSGLPSGLP
TVSLVDRTLVESITQAPTAQEAVEGPSGILELSGAHSGAPDVSGDHSGVLDLSGLQSGLL
EPSGEPSSTPYFSGDLSGTVDVSGDSSASTSTSGEASGLPEVTLITSEFVEGVTEPTVSQ
ELAQRPPVTHTPLFESSGEASASGEVSGATPMFPGAGLEASSVPESSRETSVFPEAGVGM
SAAPEASGGVSGVPEVGEATSAFPEADVEGASGLGVSSSASAFPEDPREGSATPEVQEET
TSTYAVGTESSGWPSATPMTSGDRTEVNGDLSGPTSGLDVVMSPSVPESEWIQQTQRPAE
APLEIESSSPLHSGEETQTAETATFPTDVSIPTSTRGTDESAPTIPDIDECLSSPCLNGA
TCVDAMDSFTCLCLPSYRGDLCEIDQELCEEGWTKFQGHCYRYFPDRESWVDAESRCRAQ
QSHLSSIVTPEEQEFVNNNAQDYQWIGLNDRTIEGDFRWSDGHSLQFENWRPNQPDNFFV
SGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGDPPVVEHARTFGQKKDRYEINSL
VRYQCTEGFVQRHVPTIRCQPSGHWEEPRVTCTDPSTYKRRLQKRSPRAPRRSRPSTAH
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcctggtgtttgtgactctgagagtcatcacagccgtcagctcccta
gaagcttcagaccctgacaactcgctgagtgtcagcatccccgaaccatcccctctgcgg
gtcctcctggggaactccctcaccatcccctgctacttcatcgaccccatgcatcctgtg
accaccgccccctccactgcccccctcgccccgagaattaagtggagccgcatttccaag
gagaaggaggtggtcctgttggtagccacggaagggcaggtgcgggtcaacagtgcctac
caagacaaggtctcgctgcccaactacccggccatccccagcgacgccaccttggaaatc
cagaaccttcgctccaatgactctgggatctaccgctgtgaggttatgcacggcattgag
gacagcgaggctaccgtagaggtcgtggtgaaaggcattgtgttccattacagagccatc
tccacgcgctacacgctggacttcgacagggcgcagcgggcctgcctgcagaacagtgcc
atcatcgccacccccgagcagctgcaggccgcctatgaggacggcttccaccagtgtgac
gccggctggctggccgaccagactgtcaggtaccccatccacactccaagggaaggctgc
tatggggacaaggatgagtttccaggtgtgagaacctatggcatccgcgacaccaatgag
acctatgatgtctactgcttcgctgaggagatggagggtgaggtcttctatgcgacgtct
ccggacaagttcaccttccaggaggcggccgacgagtgccggcgtctgggcgcacggctg
gccaccacgggccagctctacctggcctggcagggcggcatggatgtgtgcagtgccggc
tggctggccgatcgcagcgtgcgctaccccatctccaaggcccggcccaactgcgggggc
aacctcctgggtgtgcggaccgtctacctgcacaccaaccagacgggctaccctgacccc
ttgtcccgctacgacgccatctgctacacaggtgaagactttgtggacatcccagaaaac
ttcttcggggtgggcggcgaggaggacatcaccatccagaccgtgacctggcctgatgtg
gagttgccgctgcctggaaatgtcaccgagggtgaagcccgaggcaacgtgatcctcact
gtgagacctgtcttcggtgtctctcccactgtcccggagcccgaggagcccttcacgttc
accccggagcccgaggagcccttcacatttgccactgttggaggggccactgccttccct
gaggctgagaacaggactggagagatcaccgggccctggggtgttcccgctacgcccggc
ccagccttcactgccttcaccagtgaggaccatgttgtgcaggtgaccgcagccccaggc
acagctgaggtgtctgggcggccgcgattgcctgggggggttgtgttccactaccgccca
ggatctgcccgctactcactgacctttgaggaggctcagcaggcctgcctgcgcactggg
gctgtcatcgcctccccggagcagctccaggccgcctacgaagcaggctacgagcagtgt
gatgccggctggctgcaggaccagaccgtcagataccccattgtgagcccacggactccg
tgtgtaggtgacaaagacagcagccccggggtcaggacctacggtgtgcggccagcatca
gaaacctatgatgtctactgctacgtggacaggctcgaaggggaggtgttcttcatcaca
cgcctggagcagttcaccttccaggaagcgctggcattctgtgaatctcacaacgccacc
ctggcctccacgggccagctctacgccgcctggagccgaggcctggacaagtgctacgcc
ggctggctgtcggatggcagcctccgttaccccatcgtcactccgaggccttcctgcggc
ggagacaagccaggcgtgagaactgtctacctctaccccaaccagacaggcctccctgac
ccgcaatcccggcaccacgccttctgcttcagaggtgtctcagcagcgccctctccagga
gaagaagagggcggcacacccactccctctgtcgtggaggactggatcgctacccgagtg
gggcctggtgtggctgctgtccctgtgggcgaggagacgactgccatcccagacttcacc
attgagccggaaaaccagacggaatgggaaccggcctacagcccagcgggcacttcccca
ccgccagggatccctccaacatggcctcccaccagcacagcaacagaggagagcacagaa
gccccttctggaacggaagtgccctcagcctcagtggagccatccccctcagaggagcca
tccccctcagagaaaccatccccgtcagaggagccgtccccctcagaagagccatccccc
tcagaggaaccttcgctcccctgggaggagctgtccacactttcacccccagtgcccagt
gggactgagctgccaggctctggggaagtatccggggtacctgaagtcagtggtgacttc
acaggcagtggagaagtttcaggacatctggactctagtgcgcaaccctcaggagaaagt
gcaagcggactgccctctgaagatcttgacgccagtgggctcacctctactgtgggctca
ggcctgcttatgggaagtggactggcttcaggggatgaagataaaattccatggtccagc
attcctaaagttggaggtgagggcctagagacctctgcctctggagtaggggaactcagc
gggctaccttctggagaaggtccagaagcttctgcctctggagtaggggacatcagccgg
ataccttctggagaaggtccagaagtctctgcctctggagtagaggacctcagcaggctg
ccttctggagaaggtccagaagtctctgtctctggagtagaggacctcagtggattacct
tctggagaaggtccagaagtctctgcctctggagtagaggacctcagcaggctgccttct
ggagaaggtccagaagtctctgtctctggagtagaggacctcagtggattaccttctgga
gaaggtccagaagtctttgtctctggagtagaggacctcagtggattaccttctggagaa
ggtccagaagtctctgcctctggagtagaggacatcagccggctaccttctggagaaggt
ccagaagtctctgtctctggagtagaggacctcagaggattaccttctggagaaggtcca
gaagtctctgcctctggagtagaggaccttagtggattaccttctggagaaggtctagaa
gtcttagtttctggagtagaggacctcggtggacttccttctggagaaggtccagaagtc
tcagcctctggagtagaggacctcagccggctaccttctggagaaggtccagaagtctca
gcctctggagtagaggacctcagtggacttccttctggagaaggtccagaagtctcagcc
tctggagtagaggacctcggtggacttccttctggagaaggtccagaagtctcagcctct
ggagtagaggacctcagccggctaccttctggagaaggtccagaagtctcagcctctgga
gtagaggacttcagtggattaccttctggagaaggtccagaagtatcagcctctggagta
ggggatctcagtggacttccttctggaggagaaggaatagagacctttacctctggtgta
ggggacctcagcaggttgccttctggagaagcttctgcctccggagtaggggacctcagc
gggataccttctggagaagttccagaagcctctgcttctggagtaggggacctcagtgga
cttccttctggaagagaaggtctagagacttctgcctctggtgtaggggacctcagcggg
ctgtcttctggagaaggcccagaagcatctgcctctggaataggggacctcagtggactt
ccttctggaagagaaggtctagagacctctgcttctggagtagaggatctcagtggattg
cctttagaaggggagggtctagagacctctgtttctggcactgaggatctcagcgggtta
ccctctggaaaagaagactcaattggttcagcttctggagccttggactttggcagaata
ccttctggaactgtgggaagtgggcaagctccagaagcaagtggccttccttcagggttt
agtggtgaatattcagggatggaccttggaagtggcccatcctctggtctacctgacttt
agtggacttccctctggattcccaactgtctccctagtggatactaccttggtggaagtg
gtcacagctaccagtgcaagtgaactggaagggaggggaactattggcatcagcggtgct
ggagaaacgtcaggactgcccttcagtgagctggacattagtggggcagttagtggcctc
ccttcaggagctgaactcagtggccaagcatctgggtctcctgatatcagtggggaaaca
tctggattctttggtgtcagtggacagccatcagggtttcctgacatcagtgggggaata
tctgggctttttgaggtcagtggacagccatcagggttttctggggaaacatctggagtg
accgagcttagtggactgccctccagacaaccggatgtcagtggagaagcctctggagtt
ctttctggcagtggcccaccatttggcataaccgacatcagtggagaagaatccgggatc
cctgatatcagtgggcagccatcagggttgccagagttcagtgtgacaacttctgaagtc
cctggcctggttcccgggaccacgagtggcagtggcgagtcttctggaattacatttgtg
gacaccagtttggttgaagtgaccccaactatgtttaaagaagaagaaggtttagggtct
gtggaagtcagtggactcccttcaggggaggcagatgtctcgggcatatctgggatcatg
gatgtcagtggccaatcttctggagcaattgactctagcgggttgacatcccagcctcca
gaattcagtggcctaccaagtggagtagcggaagtcagtggagaatcctctggagcagag
actgggagcagcccgccctcgggagcctatgacagcagtggactcccatcggggctcccc
actgtgtctcttgtagacagaactttggtggaatccatcacccaggctccgacagcccag
gaagcagtagaagggccttcgggcattttggaactcagcggggcccattctggagcccca
gatgtgtctggagaccactcgggggttttggacctaagcgggctgcagtccgggctgctg
gagcccagtggagagccgtcgagtactccgtattttagcggggacctttctggcaccgtg
gatgtaagtggagattcctctgcatccacaagcaccagtggggaggcctcggggcttcca
gaagttactttaatcacttcagagttcgtggagggtgtcaccgaaccaactgtttcccag
gaacttgcccaaagaccccctgtgacacataccccgctgtttgagtccagtggagaagcc
tctgcgtctggggaagttagtggagctacaccaatgttccccggggctgggctagaagcg
tcatcagtcccggaatccagcagggagacgtctgtctttcctgaggctggggtggggatg
tctgccgcccctgaggccagcggaggagtttccggggtgcctgaggtaggtgaagccacc
tccgccttccctgaagcggatgtggagggggcctcaggcctgggagtgagcagcagtgcc
tctgcctttcctgaagaccccagggagggctcggccacccctgaagtacaagaggagacg
accagcacctatgctgtgggcacagagtcgtcaggctggccttcggccactccaatgaca
tctggagacaggactgaagtcaacggagacctgtccggtcccacgtcggggctggatgtt
gtcatgagccccagcgtcccagagtccgagtggatccagcagacccagcgccctgcagag
gcacctctagaaattgagtcctcaagccccttgcactcaggagaagagacccaaactgcc
gaaacagccaccttccccacggatgtttccatccccacttctacacgagggacagatgaa
tcagcaccaaccattccagacattgatgaatgcctctcaagtccttgtctgaatggagcc
acctgcgtggacgccatggactctttcacatgcttatgccttcccagctaccgaggggac
ctgtgtgagattgaccaggagctgtgtgaggagggctggaccaagttccagggtcactgt
taccgctacttcccggaccgcgagagctgggtggatgccgagagccggtgtcgggcccaa
cagtcacacctgagcagcatcgtcacccccgaggagcaggagtttgtcaacaacaacgcc
caagactaccagtggatcggcctgaatgacaggaccatcgaaggggacttccgctggtca
gacggacactccttgcaatttgagaactggcgccccaaccagccagacaacttcttcgtc
agcggagaggactgcgtggtgatgatctggcacgagaagggggagtggaacgacgtgccc
tgcaattaccacctgcccttcacgtgtaaaaagggcacagtggcctgcggcgatcccccc
gtggtggaacacgccaggaccttcgggcagaagaaggaccggtatgagatcaattcgctg
gtgcggtaccagtgcaccgagggctttgtccagcgccacgtgcccaccatccgctgccag
cccagcgggcactgggaggagcctcgggtcacctgcacagacccctccacatacaagcgc
agactacagaagcggagcccacgggccccacggaggagccgccccagcacagcccactga
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integrated database retrieval system
