Lutra lutra (Eurasian river otter): 125105421
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Entry
125105421 CDS
T08100
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
llv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125105421
09124 Replication and repair
03420 Nucleotide excision repair
125105421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125105421
03400 DNA repair and recombination proteins [BR:
llv03400
]
125105421
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125105421
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125105421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-UDP
TRAF3_RING
DZR_2
DNA_ligase_ZBD
Zn_ribbon_6
zf-P11
zf-RING_4
DUF1272
LMBR1
Motif
Other DBs
NCBI-GeneID:
125105421
NCBI-ProteinID:
XP_047594863
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All DBs
Position
7:107893069..108114332
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFMRGAGNCPECGTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK
KMEMYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQRQQILKRKNK
QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPIKPVTFSTGIKMGQHISLAPIQK
LEEALYEYQPLQIETCGPQVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA
FSGLFWQPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagggctgcccccggtgtaagaccactaaataccggaacccctccttgaag
ctgatggtgaatgtgtgcggacacacgctatgtgaaagttgtgtggatttactgtttatg
agaggagctggaaactgtcctgaatgtggcactccacttagaaagagcaacttcagggta
caactctttgaagatcctactgtggacaaggaggttgagattcggaaaaaagtcctaaaa
atatacaataaaagagaagaagactttcctagtctaagagaatataatgatttcctggaa
gaagtggaagaaattgttttcaacttgaccaacaatgtggatttggacaacaccaaaaag
aaaatggagatgtaccagaaggaaaataaagatgtcattcagaaaaataagttaaagctg
actcgggaacaggaggaattggaagaagctttagaggtagaaagacaggagaatgaacaa
agaagactgttcatacaaaaagaagaacaacggcagcagattctcaaaaggaagaataag
caggcttttttagatgaactggagagttctgatctccctgttgctctgcttttggctcag
cataaagatagatctacccagttggaaatgcaacttgagaaacctaaacctataaaacca
gtgacgttttccacaggcatcaaaatgggtcagcatatttcattagcacctattcaaaag
cttgaagaagctctatatgaataccaaccactgcagatagagacatgtggaccacaagtt
cctgagcttgagatgttaggaagacttgggtatttaaaccatgtcagagctgcctctcca
caggaccttgctggaggctatacttcttctcttgcttgtcacagagcactacaggatgca
ttcagcgggcttttctggcagcccagttaa
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