Lutra lutra (Eurasian river otter): 125105632
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Entry
125105632 CDS
T08100
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125105632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125105632
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125105632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
125105632
NCBI-ProteinID:
XP_047595219
LinkDB
All DBs
Position
7:50059965..50122983
Genome browser
AA seq
2589 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPDETAPTELPKESTAPAPESLTLHDYTTQPVSQEQPAQPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSSNSTGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPAS
QPQPQPPSTQPVTLSSVQQAQIMGPGQSPGQRLSVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPASSAPHTGGKIGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSR
HPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHTY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSVFNFSPFPGLSIPVPRGRKGKKVKSQSTFDIHKADWIR
KYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFP
VVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHR
VLDNFSDIVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQ
PGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARRE
KQQRWTRREQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAM
CRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALC
QPPGPELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAP
APSLSRCSTPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAQVPSLESLTLKLEHEVVAR
SRPTPQDYEMRVAPSDTTPLVSRNVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSS
STDESEDEKEEKLTADRSRSKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRAS
EWPKDRVLINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGPSNHLLDSPSLTPGEYGDSP
VPTPRSSSAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMA
NGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAP
RRAELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQMANSRNG
KKGHHAETVFNRVLPGPFTPDSSKKRARRMRPDLSKMMALMQGGGTGALSLHNTFQHSSS
GLQSVSSLGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLR
APGYPSSPATTTSGTALRLPPLQPEEDEDDEDEDDDDLSQGYDSSERDFSLIDDPMMPAN
SDSSEDADD
NT seq
7770 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatttgtttgatgacccaaatttgtttggcctggactctctg
actgatgacagcttcaaccaggtcacacaagaccccattgaggaagcccttggactacca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacctggtccccccaccagatgagacagcccccacagaacttcccaaa
gaatcgacagctccagctccagaatctttaactttgcatgattataccactcagcccgtc
agccaggagcagccagcccaacctgtcttacagacaccgacgccaacatcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcctccaatagtactggagggcaaccgcctcagtcagcccctaagattgtt
atccttaaggccccaccaagctcctcagtcactggtgcccacgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctggtggctggcacagccaatggtggaaaagtt
acttttaccaaagtgctaaccggcactccccttcgaccaggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctgctgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacaaccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctact
cagggtgaatcaaaacgcatcaccctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgttctagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccctgacccaagccaagaatgctcaggggcagcccgccaaagtagtaactatc
cagctgcaggtgcaacagccacagcagaaaatccagattgtaccacagccgccagcatca
cagccacagccgcagcctccctcaacccagcctgtgactctctcctctgtgcagcaggct
cagataatggggccaggacaaagcccaggacaaagactttcagtaccactcaaggtcgtg
ctgcagccacaggctggctcttcccaaggggcctcttctgggctctccgtagttaaagtt
ctaagtgccagtgaagtggcagctttgtcttcaccagcaagctctgctcctcatactggg
ggcaagataggaatggaagaaaatcgcaggctggagcaccaaaagaagcaagagaaagcc
aatcggattgtagcagaagctattgctagggcccgtgcccggggtgagcagaatatacct
cgggtcctaaatgaggatgaattgcccagtgttcggcctgaggaagaaggtgagaagaaa
cgcaggaaaaagagcagtggggagaggctcaaggaagaaaagccaaagaagagcaaaaca
tctggtacctctaaaactaagggcaagagtaagctaaacaccatcactcctgtggtgggt
aagaagagaaagcgtaatacctcatctgataattcagatgtagaagtcatgcctgcccag
tcaccccgggaagatgaagaaagcagcattcagaaaagacgctcaaaccgccaagttaag
cgaaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaagaa
gtggatgtaactggtccaataaaaactgagcctatcctccctgaacccgtgcaggaacca
gatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagatgca
gccatagtagacaaagtgctttctatgcggattgtgaagaaggagcttccttctggacag
tatactgaggcagaagaattctttgtcaagtacaagaactactcctatctacactgtgaa
tgggctaccatctcccaactagagaaggataaaaggatccatcaaaaactaaagcgcttc
aaaaccaaaatggctcagatgagacacttcttccatgaggatgaagaacccttcaatcca
gactatgtagaagtggataggatattggatgagtctcacagtattgacaaagacaatggg
gagcctgtaatttactacctggtgaaatggtgctcgctgccctacgaggatagtacgtgg
gagctgaaagaggatgttgatgagggcaagattcgagaatttaaacggattcagtcaaga
cacccagaactcaaaagagtaaatcgtccacaggcaagtgcctggaagaagttggagctg
tcacatgagtataaaaacagaaaccagttacgggaatatcagttggaaggggtcaactgg
ctgctttttaattggtataacaggcagaactgtatcctggctgatgagatgggactgggc
aaaactatccagtccattgccttcttgcaggaggtttataatgtgggcatccatggcccc
ttcctggtcattgccccactgtccacaattactaactgggagcgagaattcaatacatgg
acagaaatgaacactattgtataccatggcagtctggccagccgtcagatgattcagcaa
tatgaaatgtactgcaaagattcacgggggcgcctcatcccaggcgcgtacaagtttgat
gccctgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgagattgaa
tggcgttgtgtcattattgatgaggcgcatcggctaaagaaccgtaattgcaagctgctc
gatagcctcaagcacatggacctggaacacaaagtgctactcacaggaacgccattgcaa
aatactgtggaggaactgttcagcttgcttcatttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggattttggggatctcaagacagaggagcaggttcaaaagcta
caggccattctcaagccaatgatgctaagaagactcaaagaggatgttgaaaaaaatctg
gcacccaaacaggaaactatcattgaagtagagttgaccaatatccagaagaaatattac
cgggctattctggagaagaatttctccttcctttccaaaggggcaggtcatacaaacatg
cctaatctactcaatacaatgatggagttgcgcaaatgctgcaaccacccgtatctcatc
aatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatattatacctcat
gacttccacttgcaggccatggttcgttcagctggcaaattggttcttattgacaagtta
cttccaaaacttaaagctggtggccataaggttctgatcttctcccagatggtacgctgc
ctagatatcctagaggattatctaatccagaggaggtacctgtacgagcgcattgacggg
cgagtcagaggtaaccttcggcaggcagctattgaccgcttcagcaagcccgactcggac
cgctttgtcttcctgctgtgtacccgggctggtggacttggaattaatctcacggctgct
gatacctgcatcatctttgattcagattggaatccacaaaatgacctgcaggcccaggca
cggtgtcatcgaattgggcagagcaaagctgtgaaggtgtaccgtctcatcactcgtaat
tcttatgagagagagatgtttgataaggctagcctcaagttgggattggataaggctgtg
cttcagtccatgagtggtcgagatggcaacataaccggaatccaacagttctccaagaag
gagattgaagatctcttacgaaaaggggcatatgcagccataatggaagaagatgatgag
ggctccaagttttgtgaagaagacattgaccagatcttgttaagacgaaccacaaccatc
accattgagtctgaaggaaagggttcgacctttgccaaggcaagctttgttgcttctgaa
aataggactgatatttctctggatgaccccaacttttggcagaagtgggccaaaaaggct
gacctggacatggatctacttaatagcaagaataatttggtgattgacacacctagagta
cgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctctgat
ttggaaagtgaagatgacgagcgtccacgctctcgccgacatgaccgtcatcatacctat
gggcgcactgactgctttcgggtggaaaagcacctattggtgtatggttggggacggtgg
cgagatattttgtctcatggacgtttcaagcgacgtatgactgaacgagacgtggagaca
atttgccgggccatccttgtatactgtcttctgcactatcgtggggatgaaaatatcaaa
ggcttcatttgggacttgattagccctgccgaaaatggcaagacaaaagaattgcagaat
cattcagtcttcaatttctcccctttcccaggtctgtctatccctgtgccccgtggacgc
aaggggaaaaaagtaaagtcacaaagcacttttgatatccataaggcagattggatccgg
aaatataatcctgatactctgttccaagatgagagttataagaagcatttaaaacatcag
tgtaataaggtgctattgcgggtacgaatgctgtattatctgaggcaggaggttattgga
gaccaggcagagaaggtgttagggggtgccattgccagtgagattgacatatggttccca
gtagtggatcagctggaggttccaacaacatggtgggacagtgaggctgacaagtccctg
ctcattggagtctttaagcatggctatgagaaatacaatactatgagggcagacccagcc
ttatgcttcctggaaaaggctggtcgaccagatgacaaagccattgcagcagaacaccga
gtgttggataatttctctgacatagtagaaggggttgactttgataaggattgcgaagat
cctgaatataaaccactccagggtcccccgaaggaccaagatgatgagggtgatcccttg
atgatgatggatgaggagatctcagtgattgatggagatgaagcccaggtgacccagcag
ccaggccatctcttctggcctccaggctctgctctgacagctaggcttcggcgcctagta
acagcttatcagcgcagctacaagagagaacagatgaagatagaggctgcagaacgaggg
gaccggagacggcggcgttgtgaggcagccttcaagctaaaagaaattgcacggcgggag
aaacaacaacgatggacaaggcgtgaacaaactgatttctatcgagtagtgtctaccttt
ggtgtggagtatgaccccgataccatgcagttccattgggatcgcttccgtacgtttgcc
cgactggacaaaaaaacagacgaaagccttacgaagtacttccatggttttgtggccatg
tgtcgccaagtgtgccgccttcccccagcagctggagatgagcccccggaccctaatctg
ttcattgagcccatcactgaggagagggcctcacggactctctaccgtattgaattgctt
cggcgcttacgggaacaagttttatgccatccccttctggaagatcggctggcattatgt
cagcctccaggtcctgaattgcccaaatggtgggagcctgttcggcatgatggggagctt
ctacgaggggcagcccgccatggggtgagccaaacagactgcaacatcatgcaggaccca
gacttctcttttctggctgcccgtatgaattatatgcagaaccatcaggcaggagcacca
gctccatccctgtcacgctgctctacgccactgctccaccagcagtatacctcgcgcact
gcctcaccactgcccctgcgcccagatgctcctgttgaaaagccacccgaggagacagct
gcccaggtccccagtctggagagtctgactttaaaactagagcatgaggtggtggccagg
agccgaccaaccccacaagactatgagatgcgagtagccccctctgatactacccctctg
gtttcccggaatgttccaccagtcaaactggaggatgaggatgattcagactctgaactg
gacttgagcaagctgtcaccatcatcctcttcttcctcatcctcatccagctccagctcc
agcactgatgagagtgaggacgagaaggaagaaaagctaactgctgaccggtcccgctca
aagctctatgatgaagagagtcttctgtccctcactatgtcccaagatggattcccaaat
gaagatggagaacaaatgacccctgagctgctgctgctacaagaaagacaaagagcttct
gagtggcccaaggatcgtgtgcttataaaccgtattgacctcgtctgccaggctgtactc
tcagggaagtggccttctagccgccggagccaggaaatggtaacaggaggaattttgggg
ccaagcaaccacttgctagatagtccctcattgactccaggagaatatggtgactctcca
gttcccacaccacgaagtagcagcgcagcttccatggcagaggaggaagtgtccgcagtc
accacagcagcagctcagttcacgaaacttcgcagaggcatggatgaaaaggagtttaca
gttcagattaaagatgaggaaggattgaagttaacattccagaagcacaagttgatggct
aatggagtaatgggagatggacatcctctgtttcataagaagaagggaaacagaaagaag
ctagttgagctggaggtggagtgcatggaagagcctaatcaccttgatgtggacctggag
acccggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggatgcccct
cgccgggctgaactggagatgtggttacagggtcatccagagttcgctgtcgatccccga
tttctagcgtatatggaggatcgcagaaaacagaagtggcagagatgtaaaaaaaataat
aaggcagaattgaactgtttgggaatggaaccagtacagatggctaactctaggaatggg
aaaaagggtcaccatgctgaaactgtgttcaaccgggttttgccagggccttttacacca
gacagcagcaagaagcgggcccgcagaatgcgaccagacctttcaaagatgatggccctg
atgcagggcggaggcactggggccctatctctgcataataccttccaacacagcagtagt
ggcctgcagtctgtgtcatccctgggtcacagcagtgccacttctgcatctttgcctttt
atgccgtttgtgatgggtggtgcagcatcatccccccatgtagactccagcaccatgctt
catcaccaccaccaccacccccacccccaccatcaccaccatcaccatccaggcctcaga
gcccctggctacccttcttcaccagccactaccacctctggtactgccttgaggttgcca
ccactgcaacctgaggaagacgaggacgatgaggatgaagatgatgatgatttatctcag
ggctatgatagctcagaaagggacttctcactcattgatgatcctatgatgccagccaac
tcagactcaagcgaagatgctgatgactga
DBGET
integrated database retrieval system
