Lutra lutra (Eurasian river otter): 125106079
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Entry
125106079 CDS
T08100
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125106079
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125106079
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
125106079
NCBI-ProteinID:
XP_047595577
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Position
8:complement(80024179..80072400)
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AA seq
1070 aa
AA seq
DB search
MVQLSSSPFGYQSPSGRSEEGREGNMKSAKPQVNHSQHGESQRAMSPLQSALSSAASPSQ
AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEF
AKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLTQEHVQKDF
KGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT
TYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLLKTESVKESESL
MELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQSWEADYARKPNLPKCWDMLTEPDGQEKK
QESFKSWEPSVKHQEVSKPAVSLEPRKQDPKLRSTLQEEQKKQDVSKPKPAPSQWKQEAP
KSKTGYIQEEQKKQETPKPWPVQLQKEQDPKKQPPKSWTPSVQNDQDITKSWTTTTVCED
QDSRQPENPKSWENNVESQKHPLTPQSQISPKSWGVASASLIPNDQLLPRKFNTEPKDVP
KPMHQPVSSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPSSAIPSSQPPST
TPGSPVASTEQNLSSQSDFLQEPLQAAASSVTCSSNACLVATDQASSGSETEFMTSETPE
AAVPPSKQPSSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPR
KEQEIKESPYSSGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETAASYPDGTIQVSNGS
LAFYPAQTNVFPRPSQPFVNSRGSVRGCTRGGRLLTNSYRSPGGYKGFDTYRGPPSITNG
NYSQLQFQAREYPGTPYSQRDNFQQCYKRGGTSGGPRTNSRAGWSDSSQVSSPERDNETF
NSGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPI
VFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYAN
DGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaactctcttcatctccttttggttaccagtcaccttcaggccgttcagaggag
ggaagagaggggaatatgaagtcagccaagcctcaagtgaaccacagtcagcatggggaa
agccagcgggccatgagccccttgcagtctgctctcagttctgctgcctctccttcccaa
gcatatgagacatatattgataatggactcatatgccttaaacacaaaattagaaacatc
gagaaaaagaagctcaaactggaagactataaggatcgcctgaaaaatggggagcaactt
aatccagaccagttggaagcggtagaaaaatatgaagaagtactacataacttagaattt
gccaaggaacttcagaaaaccttttctggactgagccaagatctacttaaagctcagaag
aaggcccagagaagggagcacatgctaaagcttgaggctgagaagaaaaaacttcgtact
atacttcaagttcagtatgtattacagaacctgacacaggaacatgtacagaaggatttc
aaagggggcttgaatggtgcagtgtatttgcctttaaaagaacttgactacctcattaaa
ttttcaaaactgacctgccctgaaagaaatgaaagtctgagtgttgaagaccagatggag
cagtcatccttgtacttttgggaccttttggaaggtagtgagaaagcagtggtaggaacg
acatacaaacacatgaaagatctgctgtctaaattgctgaactcaggctattttgagagt
atcccagtcccaaaaaatgctaaggaaaaagaagtatcattggaggaagaaatgctaata
aaatcagagaagaaaaaacagttattgaaaactgaatctgtcaaagagtcagagtctctt
atggaacttgcacagccagagatacaaccccaggagtttcttaacagacgctacatgaca
gaagtagattattcaagcaaacaagatgaagagcaatcctgggaagcagattatgctaga
aaaccaaatctccccaaatgttgggatatgcttactgaaccagatggtcaggaaaagaaa
caggaatccttcaaatcctgggagccttctgttaagcaccaggaggtatcaaagcctgca
gtttccttagaaccgaggaaacaagatccaaaactcaggtccactctgcaagaagagcag
aagaagcaggatgtctccaaacccaagccagctcctagccaatggaagcaagaagctcct
aaatccaaaacaggatatattcaagaagaacagaagaagcaggagacaccaaagccttgg
ccggttcagctgcagaaagaacaggatccaaagaagcaacctccaaagtcttggacacct
tctgtgcagaatgaccaggacatcaccaagtcatggaccactactaccgtgtgtgaagac
caggattcaaggcagccagagaatccaaaatcctgggaaaacaatgttgagagtcaaaaa
caccccttaacaccgcaatcacagatttctccaaagtcctggggggtagcttcagcaagc
ctcataccaaatgaccagctcctgcccaggaagtttaatacagaacccaaagatgtgcct
aagcctatgcatcagcctgtaagttcttcctcgacccttccaaaggatccagtattgagg
aaagaaaaactgcaggatctgatgacccagattcaaggaacttgtaactttatgcaagaa
tctattctggattttgacaaaccttcaagtgcaattccatcgtcacagccgccttcaact
actccaggtagccccgtagcatctacagaacaaaatctatccagtcaaagtgattttctt
caagagccgttacaggctgctgcttcttcagttacttgtagctcaaatgcttgcttggtt
gctaccgatcaggcttcttcgggatctgaaacagaatttatgacctcagagactcctgag
gcagcagtgcccccaagcaagcaaccatcttcactagcttctccaaatcctcccatgtca
aagggctctgaacagggcttccagtcacctccagcaagtagtagttcagtaaccattaac
acagcgccctttcaagccatgcagacagtatttaatgttaatgcacctctgcctccacgg
aaagaacaagaaataaaagaatccccttattcatctggctacaatcaaagttttactaca
gcaagtacacaaacaccaccccagtgccaactgccagctatacatgtagaacaaactgtc
ctttctcaagagactgcagcaagttatcctgatggaactattcaagtaagcaatggtagc
cttgccttttacccagcacagacgaatgtatttcccagaccctctcaaccatttgtcaat
agccggggatctgttagaggatgtactcgtggtgggagattactaaccaattcgtatcgg
tcccctggtggttataaaggttttgatacttatagaggaccaccttcaattaccaatgga
aattatagccagctacagttccaagctagagaatatcctggaacaccttattcccaaagg
gataatttccagcagtgttacaagcgaggggggacatctggcggtcctcggacaaattca
agagcagggtggagtgattcttctcaggtgagcagcccagaaagagacaacgaaactttt
aacagtggtgactctggacaaggagactcccgtagcatgacccctgtggatgtgcccgtg
acaaatccagcagccaccatactgccagtacacgtctatcccctgcctcagcagatgcga
gttgccttctcagcagccagaacctctaatctcgcccctggaactctagaccaacctatt
gtatttgatcttcttctgaacaacttgggagaaacttttgatcttcagcttggtagattt
aattgtccggtgaatggcacttatgttttcatttttcacatgctaaagctggcagtgaat
gtgccactgtatgtcaacctcatgaagaatgaagaggtcttggtatctgcctatgccaat
gatggtgctccagaccatgaaactgctagcaatcatgcaattctgcagctcttccaggga
gaccagatatggttacgtttgcacaggggagcaatttatggaagtagttggaaatactct
acattttcaggctaccttctttatcaagattga
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