Lutra lutra (Eurasian river otter): 125106115
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Entry
125106115 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125106115
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125106115
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125106115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125106115
NCBI-ProteinID:
XP_047595674
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All DBs
Position
8:complement(134994044..135012928)
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AA seq
652 aa
AA seq
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MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGS
GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGASSTTSTGRSSQSSSQ
QFSGIGRSGQQPQPLMSQQFAQPPGATSMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgggatcgtgaccgtggaggattcggtgca
agaggtggtggtggccttcccccgaagaaatttggtaatcctggggagcgtttacgtaaa
aagaagtgggatttgagtgagctccccaagtttgagaagaatttttatgtagaacaccca
gaagtggcgaggctgactccgtatgaggttgatgaactacgccgaaagaaggaaataaca
gtaagagggggagatgtttgtcctaaacctgtatttgccttccatcatgctaacttccca
caatatgtgatggacgtgttgatggatcagcactttacagaaccaactccaattcagtgc
cagggatttcctttggctctcagtggccgagacatggtgggcatcgctcagactggctct
gggaagactctggcgtatttgctgccggcgattgtccatattaaccaccagccgtacttg
gaaaggggagatggcccaatttgtctagttctggctcctaccagagagcttgcccagcaa
gtgcagcaggtggctgatgactacggcaaatgttctagattgaagagtacttgcatttat
ggaggtgctcctaaaggtcctcagattcgagacttggagagaggtgttgagatctgtata
gctactcctggacgcctgatagatttcctggagtcaggaaagacaaatcttcgccgatgt
acttaccttgttttggatgaggctgacaggatgcttgatatgggctttgaaccgcagatc
cgtaaaattgtggaccaaatcaggcctgacaggcagacattgatgtggagtgcaacctgg
ccgaaagaagtgagacagcttgcagaggatttccttcgggattacacccagatcaatgtg
ggcaatctggagttgagtgccaaccacaacatcctccagattgtggatgtctgcatggaa
agtgaaaaagaccacaagttgatccagctcatggaggaaataatggctgagaaagaaaat
aagacaataatatttgtagaaacaaagagacgctgtgatgacctcactcgaaggatgcgc
agagatggttggccagctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgttcaggaaaggcgcccatcctcattgccacagatgtagcctcc
cgcgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctca
gaggattatgtgcaccgtattggccgaacagcccgtagcaccaacaagggcaccgcgtac
accttcttcacgccagggaacctaaagcaggccagagagctgatcaaagtgctggaagag
gctaatcaggcgatcaatcccaaactgatgcagttggtggaccacagaggaggcggcgga
ggagggggtaagggaggtcgttctcgataccggaccacgtcttcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggagtcaaagatggtggccggaga
gactctgccagctatcgggatcgtagtgaaaccgatagagccggttatgctaacggcagt
ggctacggaagtccaaattctgcctttggagcacaagcaggccaatacacctatggtcaa
ggcacctatggggcagctgcctatggcaccagtggctatacagcccaagagtatggcgct
ggcacttacggggctagtagcaccacctcaactgggagaagttcacagagctctagccag
cagttcagtgggataggccggtctgggcagcagccacagccactgatgtcacaacagttt
gcacagcctccgggagctaccagtatgataggttacatggggcagactgcctaccagtac
ccccctcctcctcctccccctcctccttcacgtaaatga
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