Lutra lutra (Eurasian river otter): 125106120
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Entry
125106120 CDS
T08100
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125106120
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125106120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125106120
03021 Transcription machinery [BR:
llv03021
]
125106120
03036 Chromosome and associated proteins [BR:
llv03036
]
125106120
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
ARID
125106120
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125106120
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
125106120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
125106120
NCBI-ProteinID:
XP_047595683
LinkDB
All DBs
Position
8:complement(62030552..62197221)
Genome browser
AA seq
1836 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTSVTSQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPAVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSISQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPSQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PSPQQVQVQVQQPQQVQMQVQPQQANAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQATGFGVQGQSSAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQTGVGLQVQTLPATQTSPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGTSGKQNSEQMDMPDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPVEPQGTLDATQQDTAKGDQLERISNGPILTLGGSPSVSSIQEAPNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSPAL
SSDVRSTNGTAECKTVKRPAEDNDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPPPYVQNVVPQNTPMTPSPAVQVQSQPNTSQPSPFSASS
QQGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQR
FSFITHLQDKHCSKDALLAGLKQDEPGQVGSQKSSTKQPAVGGTSSTPRAQKAIVNHPSA
ALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSV
LAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcagagttatgggctatctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actcttctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggtgaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaagag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttctgttggaccctgtcgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctaatgtcaagggataggtttttaaagatgaggggcatggaaattttggggaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtgatctcaacactcgag
gtgctatatatgctcacagaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggtcctgat
gcactagctgcagtgaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctgtagaacaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctctcaacatgcagtaaattagctcgtggtgga
atcctaacttcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagtagcaacgggcaggcacatattcatgtagtgggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctactcct
gttgttcgtgttgattctgttcctgatgtatctccaagtccttcacctgcaggaattcct
catggaccacaaactgtaggaaaccattttcagaggacttctgttaccagccaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatcctgcagttcatacccaccagcagcaaaatgctccagtg
actgtcattcaaaacaaagctccaattccttgtgaggtcgttaaggctacagtaatccag
aattctatatcccagacagcagttcctgttagcattgctgtgggaggaggagctgctcag
agttctgtggttcagaatcacagtacagggccacagcctgttacagttgtaaattcccag
acattgcttcatcatccatccgtaattccacaacagtctccattacacacagtggtaccg
ggacagataccttccggcactcccgtgacagtaattcagcaagctgtcccacagagtcat
atatttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccagcctgtgcaaacttcatctcaacagacatctgctggtagc
cagccacaagacactgttatcatagcaccttcacagtatgtgacaacttccgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gctggtgtcccaagtccacaaccctcaagggtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacggtggtacaacagcccattcaacaaccacagcag
ccagcccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcagacttacgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactgggcaaccaaacataactccatcttcctcgccatcacctgtcccagctact
aataaccaagtccctactgccatgtcatcttcttccacccctcaatcacagggaccaccc
cctactgtcagtcagatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
ccctcaccacaacaggtacaagtacaggttcagcagccccaacaagtacagatgcaggtt
cagccacagcaggcaaatgcgggcgttggtcagcctgcttctggtgagtcaagtctgata
aaacagctgctgcttccaaagcgtggtccttcgacgccgggtggtaagctaattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtataccag
gtggccaataaccaagcaacaggttttggagtgcaggggcaatcttcagctcagcagctg
ttggttgggcagcaaaacgttcagttggtccaaagtgcaatgccacccacagggggagtg
caaactgtgcccatctcgaacttacaaatattgccaggcccactgatttcgaacagccca
gcgaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagtgggacgcaaacaggagttggacttcaggtgcaaacacttccagccact
cagacatctccagctggacaatcatcctgtactactgctactcccccattcaaaggtgat
aagatcatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggaaccacgaacaccagcaat
ggggatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagaattaggtgagaatggaacatctggaaaacagaac
tcagaacaaatggatatgccggatatcaaaagtgatttgaaaaaacctctagttaatgga
atctgtgattttgataagggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccagtggaaccacaagggactttagat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttcgaatggacctata
ttaactttgggtggttcaccatctgtgagcagtatacaggaggctccaaatgtggcaaca
cagcagtttagtggtactgacttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccgcattctacaacctctgttatacag
gggcatcaaatcatagcagttccccactcaggatcaagagtgtcccattctcctgcccta
tcatctgacgttcggtctacaaacggcacagcagaatgcaaaactgtaaagaggccggca
gaggataatgatagggaaacagttgcaggaattccaaataaagtaggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgctgtgccggcggga
gcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcag
cacccgccgccatacgtacagaatgtggtcccacagaacactcctatgacgccttcacca
gctgtgcaagtacagagccagcctaacacttcccagccttctccattcagtgcatctagt
caacaaggggatccagtgagaaaacctggacacaacttcatgtgtctgtggcagtcttgt
aaaaagtggtttcagacaccctcacaggttttctaccatgcagcgactgaacatggaggc
aaagatgtatatccagggcaatgtctttgggaaggttgtgaaccttttcagcgacagagg
ttttcttttattacccacttacaggataagcactgttcaaaagatgccctgcttgcagga
ttaaaacaagatgaaccaggacaagtgggaagtcaaaaatcttctaccaagcagcctgct
gtagggggcacaagctcaactcctagagcacagaaggccattgtgaatcatcccagtgct
gccctgatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaa
aaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatatt
ggtaaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtg
ctagccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaat
tttacagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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integrated database retrieval system
