Lutra lutra (Eurasian river otter): 125106366
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Entry
125106366 CDS
T08100
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125106366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125106366
Spliceosome [BR:
llv03041
]
Complex A
U1 snRNP components
U1 related factors
125106366
Complex B
125106366
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
125106366
NCBI-ProteinID:
XP_047596245
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All DBs
Position
8:complement(58656707..58677245)
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AA seq
921 aa
AA seq
DB search
MDCGASLRWATLEPGRTQRDGFVASGRSERILRQLEVVGSRFWSPAPSSACPLPTGAPHD
ATTLHAPSRNSPTLSSDGTTPHESETTSHPPDAAWHHAPNASTNGGATTTHADTRNGTSH
DARNADASGACHCSAAVAGTGPPRALWSEHVAPDGRVYYYNADDKQSVWEKPSALKSKAE
LLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQPQQPQILQP
QPPQPQPEPPPGPPGPTPVPLGLLEPEPGGSEDCDMSEAAQPVEQGFLQQPEEGPSSAAG
QHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPR
YSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAE
QTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQ
TTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQ
RKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEE
LKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEK
AEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLES
ERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPP
KRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRR
HKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELSNRSPGFGIKKEKTGWDTSESE
LSEGELERRRRTLLQQLDDHQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggactgtggtgccagcctcagatgggcaactctggaacctggtaggacccagagagat
ggttttgtagcatctgggaggtcagagaggatcctaaggcagcttgaagtggtcggttcc
cgattctggtccccggcccccagcagcgcctgcccccttcccaccggggccccccatgat
gccaccacccttcatgccccctccaggaattcccccaccctttcctccgatgggactacc
ccccatgagtcagagaccaccagccatccccccgatgccgcctggcatcatgcccccaat
gcttccaccaatgggggcgccaccaccactcacgcagataccaggaatggtacctcccat
gatgccaggaatgctgatgccagcggtgcctgtcactgcagcgctgctgtggctgggaca
ggccctccgagggccctgtggagtgagcatgtggctcctgacggacgcgtctactactac
aatgctgacgacaagcagtctgtgtgggagaagcccagcgctctcaagtccaaggcagag
ttgctgctgtcccagtgcccctggaaagagtacaagtcagacacgggcaaaccttactac
tataacaaccagagtaaggagtctcgctggacccggcccaaggacctggatgacctggag
gctctagtcaaacaagaggctgcagggaaacagccgcagcagccccagatcttgcagccg
cagccacctcagccccagcctgagcccccacctgggccgcccggtcccacccctgtgccc
ctgggccttctagagcctgagccaggtgggagtgaagattgtgatatgtcagaggccgcc
cagcctgtggagcagggttttctgcagcagccggaggagggccccagcagtgctgctgga
cagcatcagccgccacagcaggaggaagaggaatcaaagccagaaccagagaggtctggc
ctcagttggagcaaccgggagaaggcaaagcaggccttcaaggagctgctgagggacaag
gctgtcccctccaatgcctcgtgggaacaggccatgaagatggtggtcaccgacccccgt
tacagtgccttgcccaaactgagtgagaaaaagcaggcgttcaatgcctacaaggcgcag
cgggagaaggaggagaaggaagaggcccggctaagggccaaggaggccaagcagaccttg
cagcatttcctggagcagcacgaacgcatgacctctaccacccgctaccggcgggcagaa
cagacctttggggagctggaggtgtgggctgtggtccctgagagggatcgaaaagaggtt
tatgatgatgtcctcttcttcctggccaagaaggagaaggaacaggccaagcagctccgg
cgccgcaacatccaggccctgaagagcatcctggatgggatgagtagtgtcaacttccaa
actacatggtcccaggcccagcagtacctcatggataaccccagctttgctcaggaccac
cagctgcagaacatggacaaggaagatgcactgatctgctttgaggagcacatccgagca
ttggagagggaggaggaggaggagcgggagcgggcccgccttcgggagcggcgtcagcaa
cgcaagaaccgggaggccttccagaccttcctggatgagctgcacgagacagggcagctg
cactctatgtccacctggatggagctgtacccagcggtcagcactgatgtccgctttgcc
aacatgctgggccagccgggctccacccctctggacttgttcaagttctatgtggaggag
ttgaaggcacgattccatgatgagaagaagatcattaaggacatccttaaggaccggggc
ttctgcgtggaggtgaacacagcctttgaggacttcgcccacgtcataagctttgacaag
agggctgctgcgctggacgcgggcaacatcaagttgaccttcaatagtctgctggagaag
gcagaggcgcgggagagagagcgggagaaggaggaggcgcgaagaatgcggcgcagggaa
gctgccttccgaagcatgctgagacaggccgtgcctgccctggagctgggcactgcctgg
gaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcagatcaccctggagtcg
gagcggatccggctcttccgcgagttcctgcaggtactggagactgaatgccagcatctc
cacaccaaaggccgaaaacatggcagaaagggcaagaagcaccatcggaagcgttcccac
tctccctcaggctcggagtcagaagaggaggagctgcccccgccatctctccgaccccca
aagcggagaaggcggaacccctcggaatcaggctctgagccctcttcctcgcttgattcg
gttgaaagtgggggtgctgcccttggaggacggggctccccatcttctcgccttctcctt
ggatcagatcatggccttaggaaagccaagaaaccaaaaaagaaaactaagaagagaaga
cacaagtcgaacagtcctgagagcgagacagaccctgaggagaaagctggcaaggagagt
gatgagaaagaaccagaacaggacaaggatagggagctgcggcgggcggaactctctaac
cgctccccaggttttggaatcaagaaggagaagacgggctgggacacgtcggaaagtgag
ctgagcgagggtgagctggaaaggcggcggcggacactcctgcagcagctggatgaccac
cagtga
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