KEGG   Lutra lutra (Eurasian river otter): 125106439
Entry
125106439         CDS       T08100                                 
Name
(RefSeq) aladin isoform X1
  KO
K14320  aladin
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125106439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125106439
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125106439
SSDB
Motif
Pfam: WD40_WDHD1_1st ANAPC4_WD40 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 PD40 Beta-prop_EIPR1 WDR90_beta-prop_4th DUF5789
Other DBs
NCBI-GeneID: 125106439
NCBI-ProteinID: XP_047596438
LinkDB
Position
8:55506943..55521342
AA seq 571 aa
MLAPLPLRPPGGARGRSGSLSRDCARVRVLALLFPSLPLNFAAPFVPHGYPYGSESSPGT
KREARSWINLPVLNLTKDPLKTPGRLDHGTRTAFIHHREQVWKRCINVWRDMGLFGVLNE
IANSEEEVFEWVKTASSWALALCRWASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLR
VFAWHPHTNKFAVALLDDSIRVYNASSTTVPSLKHRLQRNVAALAWKPLSASVLAVACQT
CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVDAAILVWDVS
TETCVPLPWFRGGGVTNLLWSPDGSKVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGC
WSPDGNRLLFTVLGEPLIYSLSFPERCGERKGRVGGAKSATIVADLSETTVQTPDGEERL
GGEAHSMVWDPSGERLAVLMKGNPRVRDGKPVILLFRTRNSPVFELLPCGIIQGEPGAQA
QLITFHPSFNKGALLSVCWSTGRIAHIPLYFVNAQFPRFSPVVGRTQEPPAGGGGSTHDL
PLFTETSPTSAPWDPLPGPPPARSHSPHSHF
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgctcgcgccgctccccctccggccaccaggcggcgcgcgaggacgctctggaagtctg
tctcgggactgcgcacgcgttcgtgttctggcgttactcttcccctcacttccgttgaat
tttgcagcgccgtttgtcccacacggctacccgtacggatccgaatctagcccgggaact
aagagggaagcgcgatcctggatcaatcttcctgtcctgaacctgacgaaggatcccctg
aagacccctgggaggctggaccatggcacaagaactgccttcatccatcaccgggagcaa
gtgtggaagagatgcatcaatgtgtggcgtgatatgggcctttttggggtgctgaatgaa
attgcgaactcagaggaggaagtgtttgagtgggtgaagacggcgtccagctgggccctg
gcactctgtcgatgggcctcctccctccacgggtccctgttcccccatctgtctctcagg
agcgaagatctgattgctgaatttgcccaagtcacaaactggtccagctgctgcttgcgg
gtctttgcctggcacccccacaccaacaagtttgcagtggccctgctagatgactcaatc
cgtgtgtataatgccagcagcactacagtcccgtccctgaagcaccggctgcagcgaaac
gtggcggccctggcctggaagccccttagtgcctctgtcctggctgtggcctgccagacc
tgcattctcatctggaccctggaccccacctctctgtctacccgaccctcttcgggttgt
gcccaagtgctgtctcaccctgggcacacacctgtcaccagcttggcctgggcgcccagt
gggggacggctgctctcagcgtcacctgtggatgctgctatcctggtatgggatgtctca
acggagacctgtgttccccttccctggtttcggggaggtggggttaccaatctgctctgg
tccccagatggcagcaaagtcctggctaccactccttcagctgtctttcgggtctgggag
gcccagatgtggacttgcgagaggtggcctactctatcggggcggtgtcagactggctgc
tggagcccagatggaaaccggctgctgttcactgtattgggggaaccactcatttactcc
ttatcattcccagaacgttgtggggagagaaaggggcgcgttggaggtgccaagtcagcc
accattgtggctgatctgtctgagacaacagtacagacaccagatggagaggaaagactt
ggaggagaggctcattccatggtctgggaccccagtggggagcgtctagctgtgctcatg
aaaggaaatccaagggtccgggacggtaaaccagtcatcctcctttttcgcactcgaaac
agccccgtgtttgagctgcttccttgtggcattatccagggggagccaggggcccaggcg
cagctcatcactttccatccttccttcaacaaaggggctctgctcagtgtgtgctggtcc
actggccgaattgcccacatccctctgtactttgttaatgcccagtttccacgttttagc
ccggtggttggccgaacccaggagcccccagctgggggtggaggctctactcacgatttg
cccctctttactgagacatccccaacctctgccccgtgggaccctctcccagggccaccg
cctgcccggtcccactctcctcactcccacttctaa

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