Lutra lutra (Eurasian river otter): 125106439
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Entry
125106439 CDS
T08100
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125106439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125106439
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125106439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
PD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
DUF5789
Motif
Other DBs
NCBI-GeneID:
125106439
NCBI-ProteinID:
XP_047596438
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Position
8:55506943..55521342
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AA seq
571 aa
AA seq
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MLAPLPLRPPGGARGRSGSLSRDCARVRVLALLFPSLPLNFAAPFVPHGYPYGSESSPGT
KREARSWINLPVLNLTKDPLKTPGRLDHGTRTAFIHHREQVWKRCINVWRDMGLFGVLNE
IANSEEEVFEWVKTASSWALALCRWASSLHGSLFPHLSLRSEDLIAEFAQVTNWSSCCLR
VFAWHPHTNKFAVALLDDSIRVYNASSTTVPSLKHRLQRNVAALAWKPLSASVLAVACQT
CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVDAAILVWDVS
TETCVPLPWFRGGGVTNLLWSPDGSKVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGC
WSPDGNRLLFTVLGEPLIYSLSFPERCGERKGRVGGAKSATIVADLSETTVQTPDGEERL
GGEAHSMVWDPSGERLAVLMKGNPRVRDGKPVILLFRTRNSPVFELLPCGIIQGEPGAQA
QLITFHPSFNKGALLSVCWSTGRIAHIPLYFVNAQFPRFSPVVGRTQEPPAGGGGSTHDL
PLFTETSPTSAPWDPLPGPPPARSHSPHSHF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccgctccccctccggccaccaggcggcgcgcgaggacgctctggaagtctg
tctcgggactgcgcacgcgttcgtgttctggcgttactcttcccctcacttccgttgaat
tttgcagcgccgtttgtcccacacggctacccgtacggatccgaatctagcccgggaact
aagagggaagcgcgatcctggatcaatcttcctgtcctgaacctgacgaaggatcccctg
aagacccctgggaggctggaccatggcacaagaactgccttcatccatcaccgggagcaa
gtgtggaagagatgcatcaatgtgtggcgtgatatgggcctttttggggtgctgaatgaa
attgcgaactcagaggaggaagtgtttgagtgggtgaagacggcgtccagctgggccctg
gcactctgtcgatgggcctcctccctccacgggtccctgttcccccatctgtctctcagg
agcgaagatctgattgctgaatttgcccaagtcacaaactggtccagctgctgcttgcgg
gtctttgcctggcacccccacaccaacaagtttgcagtggccctgctagatgactcaatc
cgtgtgtataatgccagcagcactacagtcccgtccctgaagcaccggctgcagcgaaac
gtggcggccctggcctggaagccccttagtgcctctgtcctggctgtggcctgccagacc
tgcattctcatctggaccctggaccccacctctctgtctacccgaccctcttcgggttgt
gcccaagtgctgtctcaccctgggcacacacctgtcaccagcttggcctgggcgcccagt
gggggacggctgctctcagcgtcacctgtggatgctgctatcctggtatgggatgtctca
acggagacctgtgttccccttccctggtttcggggaggtggggttaccaatctgctctgg
tccccagatggcagcaaagtcctggctaccactccttcagctgtctttcgggtctgggag
gcccagatgtggacttgcgagaggtggcctactctatcggggcggtgtcagactggctgc
tggagcccagatggaaaccggctgctgttcactgtattgggggaaccactcatttactcc
ttatcattcccagaacgttgtggggagagaaaggggcgcgttggaggtgccaagtcagcc
accattgtggctgatctgtctgagacaacagtacagacaccagatggagaggaaagactt
ggaggagaggctcattccatggtctgggaccccagtggggagcgtctagctgtgctcatg
aaaggaaatccaagggtccgggacggtaaaccagtcatcctcctttttcgcactcgaaac
agccccgtgtttgagctgcttccttgtggcattatccagggggagccaggggcccaggcg
cagctcatcactttccatccttccttcaacaaaggggctctgctcagtgtgtgctggtcc
actggccgaattgcccacatccctctgtactttgttaatgcccagtttccacgttttagc
ccggtggttggccgaacccaggagcccccagctgggggtggaggctctactcacgatttg
cccctctttactgagacatccccaacctctgccccgtgggaccctctcccagggccaccg
cctgcccggtcccactctcctcactcccacttctaa
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