Lutra lutra (Eurasian river otter): 125106464
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Entry
125106464 CDS
T08100
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125106464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125106464
Enzymes [BR:
llv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
125106464
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
Other 90S particles
125106464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
125106464
NCBI-ProteinID:
XP_047596478
LinkDB
All DBs
Position
8:42775406..42781783
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AA seq
244 aa
AA seq
DB search
MAAPNGRFQPRERRGGEQEEGWDAVAPKRPRLGAGNKIGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSVLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCVKIGTSFSI
PVVSDVRELVPSSDPIVFVVGAFAHGQVNVEYTEKMVSISNYPLSAALTCAKLTTAFEEV
WGVI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccaatggcagattccaacctcgtgaacggcgcggtggggagcaggaagag
ggctgggatgctgtggctcccaagcggccccgactcggggcgggaaacaagatcggagga
cgaaggcttattgtggtgctggaaggggccagtctggagacggtcaaggtagggaagacc
tatgagctactcaactgtgacaagcacaagtctgtgttgttgaagaacggacgggaccct
ggggaagtgagaccagacatagctcaccagagtttactgatgctgatggacagtcccctg
aaccgagctggcttgctacaggtttacatccacacacagaagaatgtgctgattgaagtg
aacccccagactcgcattcccagaacctttgaccgcttttgtggcctcatggttcagctt
ttacacaaactcagtgttcgagcagctgatgggccccagaagctcttgaaggtaattaag
aatccagtatcagatcactttccagttggatgtgtgaagattggcacttctttctccatc
ccggtggtcagtgacgtacgagagttggtacccagcagtgaccctattgtttttgtggtg
ggggcctttgcccatggccaggtcaatgtggagtatacagagaagatggtgtccatcagc
aactaccccctttctgcggccctcacctgtgcaaaactcaccacagcctttgaagaagtc
tggggggtcatctga
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integrated database retrieval system
