Lutra lutra (Eurasian river otter): 125106482
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Entry
125106482 CDS
T08100
Name
(RefSeq) nuclear pore complex protein Nup50-like isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125106482
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125106482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125106482
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125106482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
125106482
NCBI-ProteinID:
XP_047596516
LinkDB
All DBs
Position
8:140417444..140437582
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AA seq
463 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDSGGAFKG
FKGLVVPSGGGGFSGFGNGAGGKPLEGLSNGSGVTSAPPFSGARAATESKAAFGSVAANG
PTSLVDKKVLTPKTNGDSQQPSSSGPPSGAACPRSAYHKQLAALNCSVRDWIAKHVNTNP
LCDLTPIFRDYERHLAGIEQQHGSGGGRGSESEASRVPLATQSPSLFGAAKPQQDSAFPF
AGGRAEDGAERKTEPPAGAASASFSFGKKIDGSVLGSLNSGPLTGFSFSSGNSSFFGKDL
TQNKPASSPFSAKTLELQAEGGSSDYKGGDEEESDEPPKVVVTEVKEEDAFYSKKCKLFY
KKDNEFKEKGVGTLHLKPTATQKTQLLVRADTNLALLADEPQRAALPTVLPSLEGPREGS
GSSWRVLPPLQHPAERSDSAQHAVHPNREEQCLDRMCSQPARR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaggattgctgagaaggaattgacagataggaactgggatcaagaagacgaa
gcagaagaggtgggaacgttctcagtggccagtgaggaagtcttgaagaatagagccata
aagaaagcaaagcgtagaaatgttggatttgaatccgatagtggaggggcctttaaaggt
tttaaaggtttggttgtaccttctggaggaggcgggttttctggatttggcaacggtgct
ggagggaagcctttggaagggctgtctaatgggagcggcgtgaccagcgcccctcccttc
tccggcgccagggcagccacggagagcaaggcggccttcggatccgttgctgcgaatggt
cctacctccttggtggataagaaggttttaactcccaaaaccaacggggacagtcagcag
ccctcctcttccggccccccctccggcgccgcctgcccccggagcgcctaccacaagcag
ctggcggccttgaactgctccgtgcgggactggatcgccaagcacgtgaacaccaacccg
ctgtgcgacctgacgcccatcttcagagactacgagagacacctggcggggatcgagcag
cagcacgggagcgggggcggccggggctccgagagcgaggccagtcgtgtgccgctcgcc
acccagtccccttccctgttcggggcagcgaagccgcagcaggactcggcgttcccgttc
gccggcggcagggcagaggacggcgccgagaggaagacggagccgcccgcgggagccgca
agtgcctcgttcagcttcggcaagaagatcgacggttctgtcctgggctccctgaactcc
ggccccctgactgggttttcgttctcttcgggaaactccagcttcttcggcaaagatctg
acccagaataaaccagcgtcttcaccgttttccgcgaaaacgttggagttacaggccgaa
ggcggcagtagcgactacaaaggcggagatgaagaagagagtgatgagccacccaaagta
gtagttactgaagtgaaggaagaagatgcgttctactccaaaaagtgtaagctgttttac
aagaaagacaacgaattcaaagagaagggtgtgggcaccctgcatttaaaacctacggcc
actcagaagacgcagctgttggtgcgggcagacaccaatctagcgctcttagccgatgag
ccacagagagctgctttgccgaccgttctgccttcgttggaaggacctcgtgaaggctcc
gggtcgagctggcgcgtcctccctccactgcaacatcctgctgaacgttctgattccgcc
caacatgccgtgcacccgaacagggaagaacaatgtcttgatcgtatgtgttcccaaccc
gcccgtcgatga
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