Lutra lutra (Eurasian river otter): 125106645
Help
Entry
125106645 CDS
T08100
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125106645
03036 Chromosome and associated proteins [BR:
llv03036
]
125106645
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125106645
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125106645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
125106645
NCBI-ProteinID:
XP_047596953
LinkDB
All DBs
Position
8:136212249..136475607
Genome browser
AA seq
1831 aa
AA seq
DB search
MIHLPLSISPRPTICPSITEISFMRMLFASTFISAREKEQEREEQLMEDKKRKKEDKKKK
EATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAARY
MPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSTAPGANSNNAQVTGTLLQG
DGGTAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIRDKVIVDGSDMEEWPCIASK
DAESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKTK
SVQSSNSTTEGNNGLGNWRNVSGQDRVGPGSGFSNFNPNSNPSAWPALVQEGNSRKGALE
TDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSP
NPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNSGNN
GNNGKDREDSWKGASVQKSSGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTSGV
SQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTG
SEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQT
QIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSAS
TEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTSSSWNENSSKDQGWGGGRQPNQGWTSGK
NGWGEEVDQAKNSSWESSASKPVSGWGEGGQNEIGTWGNSGNASLASKGGWEDCKRSPAW
TETGRQPSSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNGRPSSSNWSSGPQPVT
PKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNLP
TPMTSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNTPSNAPNAM
KPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTAGSQGSASSHNSASWGQGGKKQM
KNKSLNLNHSLSRGVLSLLQCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPGSKMDLSV
GSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNS
TAQSRGMHTPVQPLSSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQ
QIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQ
QQQQQQRQPGMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDY
GMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPS
DTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTP
GSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKF
PDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSV
RGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLT
QGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAP
ATGWQSLETGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSL
WGVPAVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgatccaccttcctctttccatcagtccacggcccaccatttgtccttccataacagaa
atcagcttcatgagaatgctcttcgcttctactttcatctctgccagagagaaggagcaa
gaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataaaaagaaaaaa
gaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaaccaagt
ttaagccaaccaacggccgccagcccaattggcagctctccatcgccaccagtcaatggt
ggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcccgctac
atgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgttactaaaa
cgtgggcagccccctccaccgtcctgcatgctcctcgggggtggggcagggcctcctccc
tccacagcacctggagcaaactcaaacaacgcacaagtgacaggaacgctgctgcagggt
gacggtgggactgcaccagagtcaacccttggaggtgctgctgcttcaaattatgcaaat
tccacttggggcccgggagcctcctccaacaacggcgcctcccccaacccaattcacatc
cgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtatcgccagcaaa
gacgctgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaaccctggctct
gagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccagtgccag
tctgcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccctaagactaaa
tctgttcaatcttccaactctactacagagggcaacaatggactaggaaattggaggaat
gtgagtggtcaggatagagttggacctggctctggcttcagcaactttaacccaaatagc
aacccatctgcctggccagcgctggtccaagaaggaaattctaggaaaggggcattggaa
acggatacgagtaattccagtgcacaggttagcacagtaggtcaggcatccagggaacag
cagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacaggctcaa
attcataacactgatggaccaaaaaatggaaacactaactccttgaacttaagttcacca
aaccccatggagaataagggaatgccctttggaatgggcttggggaacgcctccaggagc
actgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatcttggggt
gcagctagggggccttctggaactgacacagcctctggacaaagcaattctggaaacaat
gggaacaatggaaaggatagagaggactcctggaaaggagcttctgttcagaaatcatct
gggtcaaaaaatgactcttgggacaacaataacaggtctacgggtgggtcctggaacttt
ggccctcaggactctaacgacaacaaatggggtgaagggaacaaaatgacatctggggtc
tctcagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaatggagt
ggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccaccccctc
cctgaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagctccacagga
agtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagtcat
aattctggccgtcggtcataccggcccacacatcctgattgtcaggctgtcttacagact
ctcttgagccgaactgatttggaccccagggtgctctcaaacactggctggggccaaact
caaatcaagcaggacacagtgtgggatattgaagaggtgccaaggcctgaggggaagtct
gacaaaggaactgaggggtgggagagcgctgccacacagaccaagaactcagggggctgg
ggagacgcacccagccaaagcaatcaaatgaagtctggatggggggagctctcagcctct
acagagtggaaagaccccaagaacacaggaggctggaatgactacaagaacaacaactct
tccaactggggaggcggacgaccggatgaaaagacatcttcctcttggaacgagaactcc
agcaaggatcaggggtggggaggagggcgccagcccaatcaaggatggacttccgggaag
aatggttggggagaggaagttgatcaagcgaaaaacagcagttgggaaagttctgcaagt
aaacctgtgtctgggtggggtgaaggagggcagaatgaaattggaacttgggggaacagt
gggaatgcaagcctagcttccaaaggcgggtgggaagattgcaaaaggtctccagcatgg
actgagactggcaggcagcccagttcctggaataaacagcaccaacagcagcagccgcca
cagcagccaccaccaccacaaccagaggcttccggttcatggggaggcccacccccacca
cctccaggcaatggtcgaccttccagttccaactggagcagtgggccacagccagtaacc
cctaaggatgaggaacccagtggttgggaagagccatccccacagtcaattagtcggaaa
atggacatcgatgatggcacttcagcatggggagaccctaacagttataactacaagaat
gtgaatctgtgggataagaattcccaagggggcccagcacctcgagaaccaaacctgcct
accccgatgaccagtaaatcagcatcagtctggagcaaaagcacaccacctgctccagat
aatggtacttcagcttggggtgagccaaacgaaagcagtcctgggtggggtgaaatggat
gacacgggagcatcgaccacaggctgggggaacacaccctccaacgctccaaatgccatg
aaacctaattccaaatctatgcaagatggctggggggagagtgacggtccagtgacggga
actcgccatcccagctgggaagaggaggatgatggaggagtctggaacaccgccggctct
cagggaagtgcttcctcccacaactcagcaagctggggacaaggaggaaagaaacaaatg
aagaacaagtctttgaacctgaaccactctctcagcagaggcgttctttcccttctgcag
tgctcactgaaaggaggaaacaatgattcatggatgaatcctcttgccaaacagttttca
aatatgggattgctgagtcaaactgaagataatccaggcagcaaaatggatttgtctgta
gggagccttccagataaaaaatttgacgtggacaagcgagcgatgaatctcggggatttt
aatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaagacatggga
accacagatagtgggccttatttcgagaagggtggcaatcatggtttgtttggaaatagc
acagcacaatcgagaggtatgcacacaccggtgcagccactaagttcttctcctaatctc
cgggcgcaagtgcctccgcagtttatttccccccaggtttctgcctcaatgctcaagcag
tttcccaacagtggcctgaacccaggtcttttcaatgtggggccccagttatctcctcaa
caaattgccatgctgagccagcttccacaaattccccagtttcagttggcatgtcagctt
ctcctgcagcagcagcagcagcagcagttgctacagaaccagaggaagctttctcaagcc
gtgcgccagcagcaagagcagcagctggctcggatggtgagcgcgctccagcagcagcag
cagcagcagcagcagcagagacagcctggcatgaagcactcgccctctcatcccgttggg
cccaagccacatctggacaacatggtacccaacgctctgaatgtggggctcccagacctt
caaaccaaagggccaatacctggatatggttctggcttcagctctggcggcatggactat
ggcatggttggtgggaaggaggctggaacagagtctcgctttaaacaatggacctccatg
atggagggactgccctctgtagccacacaggaagccaatatgcacaaaaatggcgctatc
gtggcccctggtaagactcgaggagggtcaccatacaaccagtttgatatcatcccgagt
gacacactgggtggccatacgggtcctgctggtgatagctggttacctgccaaatctcca
ccaacaaataaaatcggaagtaaatccagcaatgccagttggcctccagaattccaacca
ggagtgccgtggaaaggtatccaaaacattgaccctgaatctgacccctatgtcacccca
ggaagtgtgctggggggtacagccacatctcccattgtagatactgaccaccaacttctg
cgggataacaccacagggtctaattcttccctcaacacctcgctgccttcacctggtgcc
tggccctacagtgcctctgacaactcctttaccaacgttcatagcacttcagcaaagttc
cctgattacaaatcaacatggtccccagatcccataggacacaaccccactcatctctcc
aacaagatgtggaaaaaccatatttcctcaaggaacactacaccgctgccccgcccacct
cccggtctgaccaaccccaaaccgtcatctccctggagcagcacagcaccccgatcagtc
agggggtgggggacacaggactcgcggcttgcctcggcctctacctggagtgatggtggt
tcagtccgtcccagttactggctggttcttcacaatctcactccacagattgatgggtca
acgttgagaaccatctgcatgcagcatggcccactgctgacattccatctgaacctaacc
cagggcaccgccctgatccgatacagcaccaaacaggaggcggccaaggcccagaccgca
ctgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgccaccgatgacgaa
gttagccgctttctggcacaagctcagccccctacacctgcagcaaccccaagtgcaccc
gccacaggttggcagtcgctggagaccggccagacccagtcagatcccgttggaccggct
ctgaatcttttcggtgggtccacagggctcgggcagtggagcagcagcgctggtggcagc
agcggggccgatcttgctggcgcttcattgtgggggcccccaaactactcttctagcttg
tggggagtcccagctgtggaagatccccataggatgggcagccctgctcccttactacct
ggtgaccttctgggaggagggtcggattcaatctga
DBGET
integrated database retrieval system
