Lutra lutra (Eurasian river otter): 125106802
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Entry
125106802 CDS
T08100
Name
(RefSeq) histone deacetylase 2-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv03083
Polycomb repressive complex
llv04110
Cell cycle
llv04213
Longevity regulating pathway - multiple species
llv04330
Notch signaling pathway
llv04350
TGF-beta signaling pathway
llv04613
Neutrophil extracellular trap formation
llv04919
Thyroid hormone signaling pathway
llv05016
Huntington disease
llv05031
Amphetamine addiction
llv05034
Alcoholism
llv05165
Human papillomavirus infection
llv05169
Epstein-Barr virus infection
llv05200
Pathways in cancer
llv05202
Transcriptional misregulation in cancer
llv05203
Viral carcinogenesis
llv05206
MicroRNAs in cancer
llv05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125106802
03083 Polycomb repressive complex
125106802
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125106802
04350 TGF-beta signaling pathway
125106802
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125106802
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125106802
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125106802
09149 Aging
04213 Longevity regulating pathway - multiple species
125106802
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125106802
05202 Transcriptional misregulation in cancer
125106802
05206 MicroRNAs in cancer
125106802
05203 Viral carcinogenesis
125106802
09162 Cancer: specific types
05220 Chronic myeloid leukemia
125106802
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125106802
05165 Human papillomavirus infection
125106802
09164 Neurodegenerative disease
05016 Huntington disease
125106802
09165 Substance dependence
05031 Amphetamine addiction
125106802
05034 Alcoholism
125106802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125106802
Enzymes [BR:
llv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125106802
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
125106802
HDAC complexes
Sin3A-HDAC complex
125106802
BRAF-HDAC complex
125106802
REST complex
125106802
SHIP complex
125106802
MiDAC complex
125106802
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125106802
Heterochromatin formation proteins
Other heterochromatin formation proteins
125106802
Chromatin remodeling factors
NuRD complex
125106802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
125106802
NCBI-ProteinID:
XP_047597339
LinkDB
All DBs
Position
1:158856591..158858637
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGSKKKVCYYYDGDIGNYYYGQGHPMKPHRIHMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKNSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPRTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFNPIISKVMEMYQPSAVVLQCDADSLSGDRLGCFDLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGLDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDFEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggaggcagcaagaagaaagtctgctactactatgatggtgatatt
ggaaattattattatggacagggtcatcccatgaaacctcatagaatccacatgacccat
aacttgctgctaaattatggcttatatagaaaaatggaaatatataggccccataaagcc
actgctgaagaaatgacaaaataccacagtgatgagtacatcaaatttctacgttcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaggat
tgtccagtatttgatggactctttgagttttgtcagctctcaactggtggttcagttgcc
ggggccgtgaagttaaatcgacaacaaactgatatggccgttaactgggctggagggtta
caccatgctaagaactcagaagcatcgggattctgttacgttaatgatattgtacttgcc
atccttgaattactaaagtatcatcagagagtcttatatattgatattgatatccatcat
ggtgatggtgttgaagaagctttttatacgacagatcgtgtaatgactgtatcattccat
aaatatggggaatactttcccagaacaggagacttaagggatattggtgcaggaaaaggc
aaatactatgctgttaattttccaatgagagacggtatagatgatgagtcctatgggcag
atatttaatcctattatctcaaaggtgatggagatgtaccagcccagtgctgtggtgcta
cagtgtgatgcagactcactctccggtgacaggcttggttgcttcgatctgacagtcaaa
ggtcatgctaaatgtgtagaagttgtgaaaacttttaatttaccattactgatgcttggg
ggaggtggatacacaattcgtaatgttgctcggtgttggacttacgagactgcagttgcc
ctcgattgtgagattcccaacgaattgccatataatgattactttgagtattttggcctg
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatttacgcatgttacctcatgcacctggcgtc
cagatgcaagctattccagaagatgctgttcatgaagacagtggagatgaagatggagaa
gacccagacaagagaatttctattagagcatcagacaaacgaatagcttgtgatgaagaa
ttctcagattttgaggatgaaggagaaggaggacgtagaaatgtggctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaagaaacagaggacaaaaaagcagat
gttaaggaagaagataaatctaaggacaatagtggtgaaaaaacagataccaaaggagcc
aaatcagaacagctcagcaacccttga
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