Lutra lutra (Eurasian river otter): 125107046
Help
Entry
125107046 CDS
T08100
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
125107046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125107046
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125107046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_16
SET
zf-met
zf-C2H2_jaz
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
125107046
NCBI-ProteinID:
XP_047597607
LinkDB
All DBs
Position
8:complement(130108678..130138215)
Genome browser
AA seq
801 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSIANNASALDPYQSNGNVGLEPGIVSIDSRSVNTHGTQSLHP
SDGHEVALDTTITMENVSRVTSPISTDGMAEELAMDGVAGEHSQIPNGSRSHEPLSVDSV
SSNLAADTVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPSSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSV
VGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQMGVPE
HPDVHLCNCGKECNSYTEFKAHLTSHIHNHLHSQGHSSSHGPSHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEDDDSEEEELADSVG
TEDCRINSAVYSADDSLSAHK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgacttca
tcctctgtgagcaatgccttgcccgtctcagggagtcatctagggttggctgcttcaccc
actcacaatgccatccctgctccaggtctgccagtggcaattccaaacctgggtccctcc
ctgagctctttgccttctgctttatctctgatgctcccaatgggtattggggatcgaggg
gtgatgtgcgggttgcctgaaagaaactacaccctacctccaccaccttacccccacctg
gagagcagttacttcagaactattctacctggcattttatcttatttagctgacagacca
cctcctcagtatatccaccctaactctataaatgttgatggtaatacagcattatctatc
gccaataacgcttcagctctagatccctatcagtccaatggaaatgttggattagaacca
gggattgtttcaatagactctcgctctgtgaacacacatggtacccaaagtcttcacccc
agtgatggccatgaggtggccttggacacaacaatcactatggagaacgtctctagggtt
accagcccaatctctacagatggaatggcagaagaacttgcaatggatggtgttgcaggc
gagcattcccaaatcccaaatggctccagaagtcacgaacctctgtctgtagattctgtg
agcagcaaccttgcagcagacactgtaggacatggtggtgtgatacccattcatgggaat
ggcctagagctccctgtggtcatggagacagaccatattgcaagtcgggtcaacgggatg
tctgacagtgccctcagtgactccattcacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatctgtttcccttcatgaagtt
ggcctaagcctagaacctgtggctgtctcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtatcttcagacagtctttcttttgtaccatcttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaaccttgtttacaatttggtgcacgctctgt
gaccgagcttatccctcagactgtcccgatcacggaccagtgacttttgttcctgacact
ccaatagagagcagagcaaggctttctctccccaagcagcttgttctccgccagtcagtt
gtgggagcagaagttggtgtgtggactggagaaaccattcctgtgcggacttgctttggg
cctctcattggccaacagagccactccatggaagtagcagaatggacagacaaggcggtc
aaccatatctggaagatataccacaacggtgtcctagaattctgcatcattacaactgac
gaaaatgaatgtaattggatgatgtttgtgcgcaaagccaggaaccgggaagagcagaat
ttggtggcttatccccatgatggaaaaatctatttctgcacctcacaagatatccctccc
gaaaatgaactgcttttttactatagccgggattatgctcagcagatgggtgttcccgaa
cacccagatgtgcacctctgtaactgtggcaaggagtgcaattcctatacagagttcaaa
gctcaccttaccagccacatccataaccatcttcatagccagggccacagcagcagccat
gggccaagccacagcaaagaaaggaagtggaagtgctcaatgtgcccccaggcttttatc
tctccttccaaacttcatgtccactttatgggtcacatgggtatgaagccccacaagtgt
gatttctgtagcaaggcttttagtgatcccagcaacctgcggactcacctcaagatacac
acaggtcagaagaactacagatgtactttgtgtgacaagtctttcacccagaaggctcac
ctagagtcccacatggttatccacacgggtgagaagaatctcaagtgtgattactgtgac
aagttgtttatgcggagacaggacctcaaacagcatgtgctcatccacacgcaagaacgc
cagatcaagtgtcctaagtgtgataagctgttcttgagaacaaatcacttgaagaaacat
ctcaattctcacgagggaaaacgggattatgtctgtgaaaaatgtacaaaggcttatctt
accaaatatcatctcacccgccacctgaaaacctgcaaaggtcccacctccagttcatca
gcacaagaagaggaggaagatgatgactcagaggaggaagaactagcggactccgtgggg
acagaagactgtcggatcaacagtgccgtgtattcagcagatgactctctctcggcacat
aagtaa
DBGET
integrated database retrieval system
