Lutra lutra (Eurasian river otter): 125107085
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Entry
125107085 CDS
T08100
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125107085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125107085
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125107085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CPSF100_C
Nop14
Radial_spoke
RNA_pol_Rpc4
CCD97-like_C
Presenilin
DNA_pol_phi
DDHD
CobT
BUD22
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
125107085
NCBI-ProteinID:
XP_047597699
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All DBs
Position
8:complement(137358424..137390774)
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AA seq
629 aa
AA seq
DB search
MDDLDPIAILVLFEEWDLQTESSQDDQAVCRFPGEPSNVTSMASEDIAKLAETLAKTQVA
GGQLSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEGNTVGVEAARVIAKALEKKSEL
KRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSS
ACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLGLKVFVAGRNRLENDGATA
LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT
LKTLRQVEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD
KTELEKLDLNGNILGEEGCEQLQEVLDGFNMAKVLASLSDDEGEDDEEEEEEEEEEEGEE
EEEEEEEEEEEEEEEEEEEEPQQGQGEEPSTPSRKILDPNSGEPAPVLSTPPPADVSTFL
AFPSPEKLLRLGPKSSVLIAQQTDTSDPEKVVSAFLKVSSVFKDEAAVRTAVQDAVDALM
KKAFSAPSFNSNAFLTRLLIHMGLLKSEDKIKAIANLYGPLMALNHMVQQDYFPKALAPL
LLAFVTKPNGALESCSFARHSLLQTLYKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatcccatagccatcttagttctgtttgaggaatgggaccttcaaaca
gagagcagccaagatgatcaggcagtttgcagatttccaggggagcccagcaacgtgacc
agcatggcctctgaagacattgccaagctagcagagacgcttgccaaaacccaggtggcc
gggggacagctgagcttcaagggcaagagcctcaaactcaacactgcagaagatgccaaa
gacgtgattaaagagattgaagactttgatggtttagaggctctgcgcctggagggcaac
acggtgggcgtggaggcagccagggtcatcgccaaggccttggagaagaagtcagagttg
aagcgatgccactggagcgacatgttcactgggaggctgcgatccgagatcccgccagct
ctgacctcactaggagagggactcatcaccgccggggcgcagctggtggagctggacctg
agcgacaacgccttcgggcccgacggtgtgcgaggctttgaggccctgctcaagagctcc
gcctgcttcaccctccacgagctcaagctcaacaactgtggcatgggcatcggcggcggc
aagatcctagcagcggctctgactgagtgtcaccggaaatccagtgcccaaggcaagccg
ctgggcctgaaggtcttcgtggctggcagaaaccgtctggagaacgatggagccactgcc
ttggcagaagctttcgggatcattgggactctggaggaggtccacatgcctcagaatggc
atcaatcaccccggcgtcacggccctggcccaggctttcgccatcaaccccctgctgcgt
gtcatcaacctgaacgacaacaccttcaccgagaagggcgccgtggctatggccaagacg
ctgaagaccttgcggcaggtggaggtgatcaacttcggggactgcctggtgcgctccaag
ggcgccgtcgccatcgcagaggccgtgcgcgggggcctgcccaagctgaaggagctgaac
ttgtcgttctgtgaaatcaagagagatgctgctctggctgttgccgaggccgtggcggac
aagaccgagctggagaagctggacctcaatggcaacatactgggagaagagggctgcgag
cagcttcaggaagtgctggatggcttcaacatggccaaggtgctggcctccctcagcgat
gacgagggcgaggatgatgaggaggaggaggaagaggaggaggaagaggaaggggaagag
gaggaggaagaggaagaagaagaagaggaggaggaggaagaggaggaggaggaggaagag
ccacagcaggggcaaggagaggagccatccacaccgtcaaggaagattctggacccgaac
agtggagagccggcccccgtgctgtccaccccaccgcccgcagacgtctccacgttcctg
gctttcccctctccggagaagctgctgcgcctcggacccaagagctcggtgctgatagcc
cagcagactgacacctctgacccagaaaaggtggtctccgccttcctgaaggtgtcctct
gtgtttaaggacgaagccgcggtgaggacagctgtgcaggacgcagtagatgccttgatg
aagaaggccttcagcgccccctccttcaactccaacgccttcctcacccggctcctcatt
cacatgggtctgctcaagagtgaagacaagatcaaggccattgccaacttgtatggccct
ctgatggcgctgaaccacatggtgcagcaagactactttcccaaggccctcgcacccctg
ctgctggcattcgtgaccaagcccaatggtgccctggagtcctgctcctttgcccgccac
agtctgctgcagacgctgtacaaggtctag
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