Lutra lutra (Eurasian river otter): 125107416
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Entry
125107416 CDS
T08100
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv04714
Thermogenesis
llv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125107416
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125107416
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125107416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125107416
03036 Chromosome and associated proteins [BR:
llv03036
]
125107416
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125107416
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125107416
PBAF complex
125107416
GBAF(ncBAF) complex
125107416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
125107416
NCBI-ProteinID:
XP_047598448
LinkDB
All DBs
Position
8:complement(58271175..58284077)
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AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggcgctgcggctgccctgggtccgggcgggactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccctcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatacagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcatatatggatctcttggcttttgaaaggaagctggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacagtggcttcctgggaacttcgggtagaaggacggctcttggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaaattctcttccttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccacctggtggaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtaccgtcctcctgatgctagactaccagcctccccagtttaaattagatcctcgc
ctggctcggctcttgggcatccacacccagacccgtccagtgatcattcaagcactgtgg
caatatattaagacacataagctccaggaccctcacgagcgggaatttgtcatctgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagatccctcaacgg
ctgcatgccttgcttatgccaccagagcccatcatcatcaatcatgtcatcagtgttgac
ccaaatgatcagaagaagactgcttgttatgacatcgatgtggaagtggatgatactttg
aagacccagatgaattctttcctgctatctactgccagccagcaggagattgctacccta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgggaattc
atgctgagcttcgccagggaccctcagggtttcatcaatgattggctacagtcccagtgc
cgggacctcaagaccatgaccgatgtggtggggaacccagaggaggagcgccgagctgag
ttttatttccagccttgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaggccctgggaatccgaaacacatag
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