Lutra lutra (Eurasian river otter): 125107424
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Entry
125107424 CDS
T08100
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04024
cAMP signaling pathway
llv04340
Hedgehog signaling pathway
llv05200
Pathways in cancer
llv05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125107424
04024 cAMP signaling pathway
125107424
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125107424
09162 Cancer: specific types
05217 Basal cell carcinoma
125107424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125107424
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
125107424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
DUF7565
TSTD2_N
IL17
Motif
Other DBs
NCBI-GeneID:
125107424
NCBI-ProteinID:
XP_047598461
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All DBs
Position
8:complement(50401253..50411956)
Genome browser
AA seq
1156 aa
AA seq
DB search
MFNSMTPPPVSSYGEPCCLRPLPSQAPNMGTEGLPGLPFCHQANLMSGPHSYGPARETNS
CTEAPLFPPPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCASPGGSY
GHLSIGTMSPSLGFPPQMNHQKGTSPSFGGQPCGPHDPTQGGMMPHPQSRGPLPTCQLKS
ELDLLVSKCPEEPLEGDISSPNSTGTQDPLLGMLDGREDLEREEKPEPESVYETDCRWDG
CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH
KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP
YVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRAPSLSTVEPKRERDGG
PVREESRLTVPEGAVMMKLRHIDKWSKVTGLGENLSPGSLCSSLGPSLQHRSSLPLTCTC
SSLPTPKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSSLDEGPCIAGT
GLSTLRRLENLRLDQLHQLRPIGPRGLKLPSLTHTGTPVSRRLGPPVSLDRRSSSSSSVS
SAYTVSRRSSLASPYPPGSPPENGASSLPGLTPTQHYLLRARYASARGGGTPPMAAPSLD
RMGSLPAPPWRSRAEYPGYNANAGVTRRASDPARAVDRPAPARVQRFKSLGCVHMPPTVA
GGGRNFDSQLPTTVYSPQPPSITENVTMDTRELQEEPEGGTSMMGNGLNPYMDFPPTDTL
GYGGPEEAAAEAYGARGPGSLPLGPGPPTNYGLNPCPQQVSYPEHPPEPWGEFPSHSGLY
PGPKAPAGVYSQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLSAHPSDGPPRPQPLFSH
YPQPPPPQYPQSGTYTQPPPEYLPSEPRPDLDFDSPTHSTGQLKAQLVCNYVQSQQELLW
EGGGRGDPPVQETLYQSPKFLGASQVSPSPAKGPIATYGPGFAPNLPNHKSGSYPAPPPC
HENFAVGASKAPHRATAPPRLLPPLPTCYGTLKAGSTNPSCGHPEVGRLGGGPALYAPPE
GQVCNPLDSLDLDNTQLDFVAILDEAQGLSPPPSHDQGDSSEHTPPTSGPPNMAVGNMSI
LLGSLPGETQFLNSSA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcgatgaccccacctccggtcagtagctatggcgagccctgctgtctccgg
cccctccccagtcaggcccccaacatggggacagaaggactgcctggtctgcccttctgc
caccaggccaacctcatgtctggcccccacagttacgggccagccagagagaccaacagc
tgcactgaggccccactcttccctcctccccgaagtgcagtcaagttgaccaagaagcgg
gccctctccatctcacctctgtcagatgccagcctggacctgcagacagtcatccgcacc
tcacccagttcccttgtggccttcatcaactcacgctgtgcatctcccgggggctcctac
gggcacctctccatcggcaccatgagcccatctctgggattcccaccccagatgaatcac
caaaaagggacttcaccttccttcgggggccagccctgtggtccccatgaccccactcaa
ggtgggatgatgccacatcctcagtcccggggacccctcccaacttgccagctgaagtct
gagctggacctgctggttagcaagtgcccagaggagcccttggagggtgatatatccagc
cccaactccacaggcacacaggatcccctgctggggatgttggatgggcgggaggacctg
gagagagaggagaagccagagcctgaatctgtgtatgagactgactgccgctgggatggc
tgcagccaagaatttgactcccaggagcagctggtgcaccacatcaacagtgagcacatc
catggggagcggaaggagttcgtgtgtcattgggggggctgctccagggagctgaggccc
ttcaaagcccagtatatgctggtggtccacatgcgcagacacacgggcgagaagccacac
aagtgcacgtttgaggggtgccggaagtcatactcacgcctcgaaaatctgaagacgcac
ctgcgatcacacacgggtgagaagccgtacatgtgtgagcacgagggctgcagtaaagcc
ttcagcaatgccagtgaccgagccaagcaccagaatcggacccactccaatgagaagccg
tatgtgtgtaagctcccgggctgcaccaaacgctacacagatcccagctcgctccggaaa
cacgtcaagacagtgcacggtcctgatgcccatgtgaccaagcgccaccgaggagatggc
cccctgcccagggcaccgtccctgtccacagtggagcccaagagggagcgggatggaggc
cctgtcagagaggagagcagactgactgtgccggagggcgctgtgatgatgaaactcagg
catatagacaaatggtccaaggtcacaggactgggtgagaatttgagcccaggcagtctg
tgctccagcctaggcccttctcttcaacatcgctccagtttgcccctgacctgcacctgc
tcatccctccctacacctaagccacagcccagccctggggcccagtcgtcttgcagcagc
gaccactccccagccggcagtgcagccaacacagatagtggtgtggaaatgactggaaat
gcagggggcagcactgaggacctgtccagcttggatgaggggccttgcattgctggcact
ggtctgtccactcttcgccgccttgagaacctcagactggaccagctacatcaacttcgg
ccgatagggccccggggcctcaaactgcccagcctgacccatactggcacccctgtgtcc
cgccgcctgggccccccggtttctcttgaccgccgcagcagcagctccagcagcgtcagc
tcagcctatactgtcagccgccgctcctccctggcctccccttacccacctggatccccg
cccgagaacggggcatcctctctgcccggcctcacgccaacccagcactacctgctccgg
gcaaggtatgcttcagccaggggaggtggtacccccccaatggcagcacccagcctggat
cggatggggagccttcctgcacctccctggagaagccgagctgaatacccaggatacaat
gccaacgcaggggtcacccggagggccagtgacccggcccgggctgttgaccgccctgcc
ccagctcgagtccagcggttcaagagcttgggttgtgtccacatgccccccactgtggca
gggggaggacggaacttcgattcccaactcccaaccactgtctactcaccacagcccccc
agcatcactgagaatgtcaccatggataccagagagctgcaggaggagccagaaggtggg
acctccatgatgggcaatggtctaaacccctatatggacttcccacctactgatactttg
ggatatgggggacctgaggaggcagcagctgaagcgtatggagctaggggtccaggctcc
ctgcctcttgggcctggtccacccaccaactatgggctgaacccctgtccccagcaggtc
tcctatcctgagcacccacctgaaccatggggtgagttcccttcccactctgggctgtac
ccaggccccaaggctccagctggagtctacagtcagtgtcctcgtctagaacattatgga
caagtgcaggtcaagcccgaacaagggtgtccagtgggttctgactccacaggactggcg
ccctgcctcagtgctcaccccagtgacgggcctcctcgcccacagcctctgttctcccac
tatccgcagcctccccctccccaatatccccagtcaggtacctacacccagccaccccct
gaatatcttccttcagagcccaggcctgacctggactttgactcccccactcactccaca
ggacaactcaaggctcagctggtgtgtaattatgttcagtctcaacaggaactgctctgg
gagggtgggggcaggggagatcccccagtccaggaaactctctaccagagtcccaagttt
ctaggggcttcccaggttagccccagccctgccaagggtccaatagccacgtatggacct
ggctttgcacctaacttgcccaatcacaaatcgggctcctatcccgcccctccaccctgc
catgaaaattttgcagtgggggcaagcaaggccccccatagggcaacagcaccaccccga
cttctgcccccactgcccacttgctatgggaccctcaaggcagggagcaccaaccccagt
tgtggtcatcctgaggtaggcaggctgggagggggtcctgccttgtatgctcctcctgaa
gggcaggtgtgtaaccctctggactctcttgaccttgacaacactcagttggactttgta
gctattctggatgaggcccaggggctgagtcctcccccttcccatgatcagggggacagc
tctgaacacaccccgcctacctctgggccccccaacatggccgtgggcaacatgagtatc
ttactgggatccctgcctggggagacacaattcctcaactctagcgcctga
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