Lutra lutra (Eurasian river otter): 125108265
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Entry
125108265 CDS
T08100
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125108265
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125108265
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125108265
Membrane trafficking [BR:
llv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125108265
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125108265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
AAA_16
Mg_chelatase
MIT
DUF815
IstB_IS21
AAA_24
nSTAND3
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-GeneID:
125108265
NCBI-ProteinID:
XP_047599773
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All DBs
Position
9:25832197..25888775
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AA seq
616 aa
AA seq
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MNSPGGRGKKKGSGGCSSPVPPRPPPPCLAPARPAPRPAPPPESLHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGEAESVRAFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPAAGTHKSTPKTNRTNK
PSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggacgagggaagaagaaaggctccggcggctgcagcagcccggtg
cctcccaggcctccgcccccctgcctggcccccgcccgtcccgcccccagaccggccccc
cctcccgagtcgctgcataagcgaaacctgtactacttctcctacccgctgttcgtaggc
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggctgccaagaggagctcccgggccgcgccagcgccggcc
tcggcctcgcccccggcgccagtgccgggcggggaggccgagagcgtccgagccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcagga
caaaaggagcaagctgtggaatggtataagaaaggtattgaagaactagagaaaggaata
gctgtcatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggaccgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggatgtctataatgacagtactaacttgacatgc
cgcaacggacatctccagtcagaaagtggagctgttccaaaaagaaaagatcccttaaca
cacactagtaattcacttcctcgttcgaaaactgttatgaagactggatccacaggtctg
tcagggcaccacagagcacctagttgtagtggcttatccatggtttctggagtgagacag
ggacctggtcctgcggctggaactcataagagtacaccaaaaacaaatagaacaaataaa
ccttctacccctacaactgctgctcgtaaaaagaaagacttgaagaactttaggaatgtg
gacagcaaccttgctaatcttataatgaacgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctgggcaagagttggctaaacaagccttgcaagaaattgttattctt
ccttctctgaggcctgagttgttcacagggcttagggctcctgccagaggattgttactg
tttggtccacctggaaatgggaaaacaatgctggctaaagcagtagctgcagaatccaat
gcaaccttctttaatatcagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcagccttccataatttttata
gatgaagttgatagccttttgtgtgaaagaagagaaggagaacatgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacaatctgctggagatgacagagtg
cttgtaatgggtgcaactaacaggccacaagagctggatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttgccaaatgaggagacacgactacttttacttaaaaat
ctattatgtaaacaaggaagcccattgacccaaaaagaactagcacaacttgctagaatg
actgatggatattcaggaagtgatctaacagctttagcaaaagatgcagcactgggtcct
atccgagaactgaaacctgaacaagtaaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtgagccctcaaacc
ttagaagcatacatacgttggaacaaggactttggcgataccactgtttaa
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