Lutra lutra (Eurasian river otter): 125108367
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Entry
125108367 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03460
Fanconi anemia pathway
llv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125108367
09124 Replication and repair
03460 Fanconi anemia pathway
125108367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125108367
03400 DNA repair and recombination proteins [BR:
llv03400
]
125108367
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125108367
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125108367
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
125108367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-rbx1
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
125108367
NCBI-ProteinID:
XP_047600040
LinkDB
All DBs
Position
9:64466249..64557090
Genome browser
AA seq
375 aa
AA seq
DB search
MAEMEASLLRQCPLLLPQNRAKTVYEGFISAQGRDFHLRIVLPEDLQMKNARLLCSWQLR
AILNGYHHIVQQRMQHSPDLMSFMMELKMILEVALKNKQELYAPPLPPQFYSSLIEEIGT
LGWDKLVYVDTCLSTIKLKAEDASGRKHLITLKLKAKYPAESPDCFVDFPVSFSISWTPQ
SSLISIYGQFLAALESLKAFWDVMDEIDEKTWVLEPEKPTRSATARRIALGNNASINIEV
DPRHPSMLPEYCFLGADHVVKPLGIKLSRNIHLWDPENSLLQNLKDVLEIDFPARANLEK
SDFSMDCGICYAYQLDGAIPNQVCDNSQCGQPFHQICLYEWLRGLPTSRQSFNIIFGECP
YCSKPITLKMSGRKS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggaagcgagcctgttgcgccagtgcccgctgcttctgcctcagaaccgg
gcgaaaaccgtgtacgaaggattcatttcggctcagggacgtgattttcaccttagaata
gtgttgcctgaagatttacaaatgaagaatgcaagattattatgtagttggcaactgaga
gcaatacttaatggataccatcacatagtacaacagagaatgcagcactctcctgatcta
atgagctttatgatggagttgaagatgattttggaagttgctttaaagaataaacaagag
ttgtacgcaccacctctgcctccccagttctactccagccttattgaagagataggaact
cttggttgggataaacttgtatatgtggatacttgtctcagtaccatcaagttaaaagct
gaagatgcttctggtagaaagcatctaataactctcaagttgaaggcaaagtacccagca
gaatctccagattgtttcgtggattttcctgtttcattttctatttcctggacaccacag
agctccttaataagcatttacggtcagtttttggcagccttagaatcactgaaggcattc
tgggatgttatggatgaaatcgatgagaagacttgggtgcttgaaccagaaaaacctacc
cggagtgcgacagcacgcagaattgcactaggaaataatgcttcaataaatatagaggtt
gaccccaggcatcctagtatgcttccggagtactgctttcttggagcagaccatgtggta
aaacctctgggaattaagctgagcagaaacatacatttgtgggatccagaaaatagtctg
ttacaaaacttgaaagatgttttagaaatagatttcccagctcgtgctaacctggaaaaa
tctgatttttctatggattgtgggatttgttatgcctatcagcttgatggcgccattcct
aatcaagtgtgtgataactcccagtgtggacagcctttccatcaaatatgcttatatgag
tggttgagaggactaccgactagtagacagagttttaacatcatatttggtgaatgccca
tattgtagcaagccaattaccttgaaaatgtctggaaggaaatcctga
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integrated database retrieval system
