Lutra lutra (Eurasian river otter): 125108378
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Entry
125108378 CDS
T08100
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125108378
Spliceosome [BR:
llv03041
]
Common components
Common spliceosomal components
General mRNP proteins
125108378
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
125108378
NCBI-ProteinID:
XP_047600063
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All DBs
Position
9:complement(120972624..121006544)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacggaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtaggagcaaagaaaggagg
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaagaaagagatgcaaggacagttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcgaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
ataactgaagatatgcttcggggaatctttgagccttttggaaggattgaaagtatccaa
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacagcttaatggatttgagttagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcattcttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagaaggtacaggtttgcagattccaccagcagcacagcaggctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagactgaagcttcagctttagctgcagctgcctccgttcagcct
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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