Lutra lutra (Eurasian river otter): 125108489
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Entry
125108489 CDS
T08100
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04814
Motor proteins
llv04962
Vasopressin-regulated water reabsorption
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125108489
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
125108489
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125108489
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125108489
05016 Huntington disease
125108489
05022 Pathways of neurodegeneration - multiple diseases
125108489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125108489
03036 Chromosome and associated proteins [BR:
llv03036
]
125108489
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125108489
Membrane trafficking [BR:
llv04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125108489
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
125108489
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
125108489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
125108489
NCBI-ProteinID:
XP_047600325
LinkDB
All DBs
Position
9:50249133..50278618
Genome browser
AA seq
1281 aa
AA seq
DB search
MAQSKRHMYSRTPSGSRMSTEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE
GTDSTAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEIVRQQRERLQEELSQAE
STIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRGAAGEQLSFAAGLVYSL
SLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEASDI
ALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGAQVSDTLLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGTPSSSPYECLRQSSNILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQ
ADIDQLEAEKAELKQRLNNQSKRTIEGLRGPPPSGIATLVSGIAGEEQQRGGAPGQAPGS
VPGPGLVKDSPLLLQQISAMRLHISQLQHENSILKGAQMKASLAALPPLHVAKLSPSPHE
GPDSELAAGVLYRKTSQLLETLNQLSTHTHVVDITRSSPAAKSPSAQLLEQVAQLKSLSD
TIEKLKDEVLKETVSQRPGATVPTDFAIFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLG
QRHRLVLTQEQLHQLHGRLIS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcatatgtacagccggacgcccagtggcagcagaatgagtaca
gaggcaagtgcccggcctctgcgagtgggctcccgtgtggaggtgattggaaaaggccac
cgaggcactgtggcctatgtcggagccacactctttgccactggcaaatgggttggcgtg
atcctggatgaagcaaagggcaagaatgatggaactgtccaaggcaggaagtacttcact
tgtgatgaagggcacggcatctttgtgcgtcagtcccagatccaggtatttgaagatgga
gcagatactacttccccagagacaccagattcttctgcctcaaaggtcctcaaaagagag
ggaacggactcaactgcaaagaccagcaaactgcggggactgaagcctaagaaggcaccg
acagcccgaaagaccacaactcggcggcccaagcccacccgccctgccagtactggggtg
gctggggccagtagctctctgggcccctctggctcagcatcagcaggtgagctgagcagc
agtgagcccagcaccccggctcagacaccgctggcggcacccatcatccccacgccggct
ctcacttctcctggagcagcacctccgctaccttccccctccaaggaggaggaggggctg
agagcccaggtgcgggacctggaggagaaactggagaccctgcggttgaaacgggcggaa
gacaaggcgaaactaaaagagctggagaaacataagatccagctggagcaggtgcaagaa
tggaagagcaagatgcaggagcagcaggcagacctgcagcgacgcctcaaggaggcgcgg
aaggaagccaaggaggccctggaggcaaaggaacgctacatggaggagatggctgatact
gccgatgccatcgaaatggccactctggacaaggagatggccgaagagcgggccgagtcc
ctgcagcaggaggtggaggcgttgaaggaacgtgtggatgagctcaccaccgacttagag
atcctcaaagctgagatagaagagaagggctcagatggggcagcgtccagttatcagcta
aagcagctcgaggagcagaacgcccgcctgaaggacgccctggtgaggatgcgggatctt
tcttcctctgagaagcaagagcatgtgaaactccagaagctcatggagaagaagaaccaa
gagctggagattgtgaggcaacagcgggagcgtctgcaggaggagctgagccaggcagag
agcaccattgatgagctcaaggagcaggtggatgctgctctgggtgccgaggagatggtg
gagatgctaacagaccggaacctgaatctagaagagaaagtacgagagttgagagagact
gtgggagacttggaagcgatgaatgagatgaatgatgagctgcaggagaatgcacgcgag
acagagctggagctgcgggagcagctggacatggcgggtgcgcgggtccgggaggcccag
aagcgtgtggaggcagcccaggagacggtcgcagactaccagcaaaccataaagaagtac
cgccagctgaccgcccaccttcaggatgtgaatcgggaactgacaaaccagcaagaagca
tctgtggagaggcagcagcagccacccccagagacttttgacttcaaaatcaagtttgct
gagactaaggctcatgccaaggcaattgagatggaattgaggcagatggaggtggcccag
gccaaccggcacatgtccctgctgacggccttcatgcctgacagcttccttcggccgggt
ggggaccatgactgcgtcctggtactgctgctcatgcctcgtctcatttgcaaggcagag
ctgatccggaagcaggcccaggagaagtttgaactaagcgaaaactgttcagagcggccc
gggctccgaggagctgcaggggagcagctgagctttgctgccgggctggtgtactcgctg
agtctgttgcaggccacgctccaccgctacgagcacgccctctctcagtgcagcgtggac
gtatataagaaggtcggcagcctctaccctgagatgagtgcccatgagcgctccttggat
ttcctcattgagctattacacaaggatcaactggacgagactgtcaacgtagagcctctc
accaaggccatcaagtactaccagcatctgtatagtatccatcttgctgaacagcccgag
gacagtaccatgcagctggctgaccacattaagttcacccagagtgccctggactgcatg
agcgtggaggtgggacggctgcgtgccttcttgcagggtggccaggaggcttcagatatt
gcccttctgctccgggacctggagacatcgtgcagtgacatccgccagttctgcaagaag
atccgaaggcgaatgccagggacagatgctcctgggattccagccgctctggcctttgga
gcacaggtgtcggacacgctcctagactgcaggaaacacttgacgtgggtggtggccgtg
ctgcaggaggtggcagccgctgccgcccagctcattgccccactcgcagagaatgaggga
ctgccggtggctgcgctggaggagctggctttcaaagcgagtgagcagatctacgggacc
ccttctagcagcccctatgagtgtctgcggcagtcgagcaacatcctcatcagtaccatg
aacaaactggccacagccatgcaagagggcgagtatgatgcagagcggccccccagcaag
cctcccccagttgagctgagggctgcagcccttcgtgcagaaatcaccgatgctgaaggc
ctgggcttgaagcttgaagatcgagagacagttatcaaggagttgaagaagtcattgaaa
atcaagggggaggagctgagcgaggccaatgtgcggctgagcctcctggagaagaagctg
gacagcgctgccaaggatgcagacgagcgcattgagaaagtccagactcggctggaggag
acgcaggccctgctgcggaagaaggagaaggagtttgaggaaacgatggatgcactccag
gctgacattgaccagctagaggcagagaaggcagagctaaagcagcggctgaacaaccag
tcaaagcgcacgatcgaggggctccgggggccccctccctcgggtattgctaccctggtc
tctggcattgctggtgaagaacagcagcgaggaggtgcccctgggcaggctccaggatct
gtgccaggccctgggctagtgaaggactcaccactgctgcttcagcagatctctgccatg
aggctgcacatctcccagctccagcatgagaacagcatcctgaagggagcccagatgaag
gcatctttagcagccctgccccctctgcatgtggcaaagctctccccctcacctcacgag
ggccctgacagtgaactagcagctggtgtgctgtatcgtaagaccagccagctgttggag
acgttgaatcaactgagcacacacacccacgtagtagatatcactcgttccagccctgct
gccaagagcccatcggcccagctcctggagcaggtggctcagctcaagtccttaagtgac
accatcgagaaactcaaggatgaggtccttaaggagaccgtatctcagcgccctggagcc
acagtccccactgactttgccatctttccttcatcagccttccttagggccaaggaggag
cagcaagacgacacggtctacatgggcaaagtgaccttctcgtgcgcagctggccttgga
cagcgacaccggctggtgctgacccaggagcagctgcaccagcttcatggtcgcctcatc
tcctaa
DBGET
integrated database retrieval system