Lutra lutra (Eurasian river otter): 125108565
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Entry
125108565 CDS
T08100
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125108565
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125108565
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
125108565
NCBI-ProteinID:
XP_047600524
LinkDB
All DBs
Position
9:6893183..6970729
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AA seq
589 aa
AA seq
DB search
MDLEEAKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVINTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQQILYQQAEALKTLGVGPELKDEVLHNFWKRYLQKSKQAY
CKNPVYTRGRKATVLEDNPSHSDWDSEPDLLSDFSCPSVVESGPDSQLDGHTQKPFPISK
VSQSETASICSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETITLSDLLRFVE
EGHIPYINAFQHFPEEMKLYGRDKGIFAIESWPAYEDIYKKMIEIAKFLDLPRFPDITED
CYFHPDILCMKYLMEVNLPDEMNDLTCQVVKMTGIGEVDFLTFDPIAKMAKTVKYDIQAV
AVIVVVLKLLFLLDDNLEWTLSNIAEKYNEKNKEDKPWFDFRKWYQVMKKSVDEKKQKWE
EARAKYVWKSEKPLYHSSIDRAVVYKRREMVVSLQKQFSALTDSASTVEKKSPSSFQFNW
TEGDSAGTCFHGHSLQGILNKKGQSLTTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSY
QFIINLFSFLLRIKASSLHEEVSLIEKRLFKRKYSKTKKKSRSRKRRKY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaagcgaaagagttcaaagaaaggtgcactcagtgtgctgctgtctct
tggggtcttactgatgaaggcaaatattattgtacttcttgccacaacgttacagaaaga
tctaaggaagtcataaacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaaagaaaactcgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcagatactttatcaacaagcagaagccttaaagacccttggagtaggcccagaatta
aaggatgaagttttgcataacttttggaagcgctacctgcagaagagcaagcaggcctat
tgtaagaacccggtttataccaggggaaggaaagctacggtattagaagataacccaagt
cattcagactgggatagtgagcctgacctgctgagtgactttagctgcccttctgttgtt
gaaagtggaccagactctcagctcgatggtcacactcagaagcctttccctatcagcaaa
gtgtcgcaatcagaaacagcatccatctgttctggctctctcgatggagtcgaatattcg
ctacgaaaggagaagggaatcgtgaagatgacagtgccaaggacacttgctttttgctat
ctgtctttactgtggcagagagagacaattactctttcggatcttctgagatttgttgaa
gagggccacattccttatataaatgcttttcagcatttcccagaagagatgaaattatat
gggcgcgacaaaggaatttttgctatagagtcttggcctgcctatgaggatatctataaa
aaaatgattgaaattgccaaattcttagatttgccacgttttccagacataactgaagac
tgctattttcacccagatatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgaatgatttaacctgccaagtggtaaaaatgactgggataggagaagtggatttt
ctgacatttgatcctatagctaaaatggcaaaaactgttaaatacgacatacaggccgtc
gctgtcattgtcgtagtgttgaaactgctctttttgttggatgacaatttagaatggact
ttgtctaatattgccgagaaatataatgaaaagaacaaagaagataagccatggtttgat
ttcaggaaatggtaccaagttatgaagaaatctgttgatgagaaaaaacaaaagtgggaa
gaagccagggcaaagtatgtgtggaaaagcgaaaagccactctaccactcatccattgac
agagcagtggtatataaaagaagagaaatggtggtgagtctacaaaaacagttcagcgca
ctgactgattcagcatcaactgttgagaaaaaaagtccttcaagttttcagttcaactgg
actgaaggagactctgctggaacctgtttccatggccatagcctccagggcatcctgaac
aagaaaggccagtcactgacaaccaagaattcactctattggcttagtacccagaaattc
tgtagaagctattgtaaacacgtgacaacctatgaagaatcgaatttttcgctgagttat
cagttcataataaatctcttctccttcctgctgagaataaaggcctcttctctccatgaa
gaagtgagcttaattgaaaagagactttttaaaagaaaatacagtaaaacgaaaaaaaaa
tcaagatccaggaaacggagaaaatattga
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