Lutra lutra (Eurasian river otter): 125108595
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Entry
125108595 CDS
T08100
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
llv05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125108595
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
125108595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125108595
03036 Chromosome and associated proteins [BR:
llv03036
]
125108595
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125108595
Coactivators
SAGA/TFTC/STAGA complex
125108595
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125108595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TMP_3
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
125108595
NCBI-ProteinID:
XP_047600598
LinkDB
All DBs
Position
9:complement(142390699..142454486)
Genome browser
AA seq
1070 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPYRAAPCVPAGPAAKLSALE
AGAGAAAGPGTGACAPGAAAAPAAQPAARNGPPGGPGAAQTLNGSAALGTSLRAAAAPAV
SLLHNGPAPPAPPPKPAAAATVIQTPPFLGAPAAPAPRAPSPPAPPAPAAPPAAAAAPPP
PPPPAAASLARPPGPPAGTPAAAQNGGSAAPAPALAPAPAPAPAPAPAPAPAPAPAPAPA
PPPAANSQPGPATAAAPAQVAKADSPKTAVQPAPAPPQALAASCPAGAGAGMILGPTMQG
ALPAAAAAGLPPPPPAPGTPTGLPKGSASAGPQSLPRTPSATSGGIRATLTPTVLAPRLP
QPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHVQTQPQTSMAARPATP
TSAPPVQISTVQAPGTSIIARQVTPTTIIKQVSQAQTTVPPTTALQRSPGVQPQLVLGGA
AQTTSLGTATAVQQTGTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQST
ETAANVKELVQSLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAF
IQQSQQQPPPASQATTALTAVVLSSSVQRTAGKTPATVTSALQPPVISLTQPTQVGAGKP
GQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHSRIVLTAPPQIQLNQLQPVPVVK
PAVLPGTKALSAVSAQAAAAQKNKLKEPGGSSFRDDDDINDVASMAGVNLSEESARILAT
NSELVGTLTRSCKDETFLLPAPLQRRILEIGRKHGITELHPDVVSYVSHATQQRLQNLVE
KISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSR
QEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEGSGPG
SAVPGGSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKALLK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagcggccgtgccggccgagggcgcgcccgcagcggcgccggagccg
ccccccgcaggtagagcgcggcgcggcctgagcgcgggcgggcgccggccgggcccgcgt
ccttaccgcgccgccccgtgtgtccccgcagggcccgccgcgaagctgagcgcactcgag
gccggcgcgggcgctgcggccgggcccgggaccggggcctgcgcgccgggggccgcggcc
gcgcccgccgcccagcccgccgcccgcaacggcccgcccggcggccccggcgccgcgcaa
actttgaatgggagcgccgcgctggggacctcgctccgcgccgccgccgcacctgctgtc
agcctgctccacaacgggcccgcgccccccgcgccgccgcccaagcccgccgccgccgcc
actgtcatccagacgccgcccttcctcggcgcccccgccgcgcccgcgccccgcgccccc
tcgccgcccgcgccccccgcgcccgccgcgccccccgccgccgccgccgccccgccgccg
ccgccgccgcccgccgccgccagcctggcccggccgcccggccccccggccggaaccccg
gcggccgcgcagaacgggggcagcgccgcgcccgcgcccgccctcgcgcccgccccggcc
cccgcgcccgctccggccccagcccccgcgcccgctccggcccccgcgcccgcgcccgcc
ccgccgcccgccgccaacagtcagcccgggcccgccaccgccgccgcgcccgcgcaggtg
gccaaggccgactcgcccaagacggcggtgcagccggcgcccgcgccgccgcaggccctg
gcggccagctgcccggccggcgcgggggccggcatgattctcgggccaactatgcaaggg
gcgctgcccgccgctgccgccgctggactgccgccgccgccgccggcccccggcaccccc
accgggctgcccaagggctcggccagcgcggggccccagagcctgcccaggacgccgtcg
gccaccagcggcgggatccgggccacgctgacgcccacggtcctcgccccccgcctgccg
cagccgcctcagaacccgaccaacatccagaacttccagctgcccccaggtatggtcctc
gtgcggagcgagaacgggcagttgttaatgattccccagcaggccttggcccagatgcag
gcccaggcccacgtgcagacccagcctcagaccagcatggcggcccgccctgcgaccccc
acaagtgcccctcccgtccagatctccaccgtccaggcgcccgggacctccattatcgcg
cggcaggtgaccccaacgaccataatcaagcaggtgtctcaggcccagacgacggtaccg
cccaccacagcgctgcagcgctcgcccggagtgcagcctcagctggttctgggtggcgcg
gcccagacgacttccctcgggacggcgacggctgttcagcagacggggacacctcagcga
acggtcccaggggccactaccacctccacagctgccacggaaaccatggaaaacgtgaag
aaatgtaaaaatttcctgtctacgctaataaagctggcttcgtctggcaaacagtccacg
gagaccgccgctaacgtgaaggagctagtgcagagcctgttggatggaaagatcgaagca
gaagatttcactagtagattataccgcgaacttaattcttcacctcaaccttaccttgtg
cctttcctgaagaggagcttgcctgccttgagacagctgacccccgactccgcagccttc
atccagcagagccagcagcagccgccgcccgcctcgcaggccaccaccgcgctcacggcc
gtggtgctgagcagctcggtccagcgcacggccgggaagacgccagccaccgtgaccagc
gctctccagccccctgtcatcagcctcacgcagcccacacaggttggcgctggcaagccg
gggcagcccacgccgctggtgatccagcagccgcccaagcccggagcgctgattcggccg
ccgcaggtgacactgacgcagacgccgatggtggctctccggcagcctcacagccgcatc
gtgctcaccgcgcccccacagatccagctgaaccagctgcagccggtccccgtggtgaag
cccgccgtgctacctggaaccaaagctctctctgccgtctcggctcaagcagctgctgcg
cagaaaaacaaactcaaggagcccgggggcagctcgtttcgggatgacgatgacatcaat
gatgtggcctcgatggcgggagtgaacctgtccgaagaaagcgcacggatattagccacg
aactctgaattagtgggcaccctgacacggtcctgtaaggacgaaaccttcctcttacca
gcgcctttacaaagaagaatcttagaaatagggagaaaacacggcatcactgagctgcac
ccagatgtagtgagttacgtgtcccacgccacgcagcagaggctacagaaccttgtagaa
aagatatcagaaacggctcagcagaagaacttctcttacaaggacgacgacaggtacgag
caggcaagtgacgtccgggctcagctcaagttttttgagcagctcgaccaaattgaaaag
cagaggaaagatgagcaggagagagaaatcctcatgcgggcggccaagtctcgatccaga
caagaagatccagaacaattaaggctgaaacagaaggcaaaagagatgcagcaacaggag
ctggcacagatgcggcagcgcgatgccaacctcacagcgctcgccgccatcgggcccagg
aagaagaggaaagtggactcgccggggccggggtcggggactgaggggtcgggcccaggc
tccgcggtcccaggcggctccggcgttggaacccccagacagttcacaagacaaaggatc
acgcgggtcaacctcagggacctcatattttgtttagagaatgagcgtgagacaagccat
tcactgctgctctacaaggcactcctcaagtag
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integrated database retrieval system
