Lutra lutra (Eurasian river otter): 125108641
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Entry
125108641 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein-like
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04062
Chemokine signaling pathway
llv05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
125108641
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
125108641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ_6
PDZ
PH
PH_10
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
125108641
NCBI-ProteinID:
XP_047600716
LinkDB
All DBs
Position
9:complement(131709380..131886074)
Genome browser
AA seq
1648 aa
AA seq
DB search
MEGPGGSDPSGDGAGDGAHPDPRVPSAAAPSSGPCAAARESERQLRLRLCVLNEILGTER
DYVGTLRFLQSAFLHRIRQNVADSVEKGLTEENVKVLFSNIEDILEVHKDFLAALEYCLH
PEPQSQHELGNVFLKFKDKFCVYEEYCSNHEKALRLLVELNKIPTVRAFLLSCMLLGGRK
TTDIPLEGYLLSPIQRICKYPLLLKELAKRTPGKHPDHPAVQSALQAMKTVCSNINETKR
QMEKLEALEQLQSHIEGWEGSNLTDICTQLLLQGTLLKISAGNIQERAFFLFDNLLVYCK
RKSRVTGSKKSTKRTKSINGSLYIFRGRINTEVMEVENVEDGTADYHSNGYTVTNGWKIH
NTAKNKWFVCMAKTAEEKQKWLDAIIREREQRESLKLGMERDAYVMIAEKGEKLYHMMMN
KKVNLIKDRRRKLSTVPKCFLGNEFVAWLLEIGEISKTEEGVNLGQALLENGIIHHVSDK
HQFKNEQVMYRFRYDDGTYKARSELEDIMSKGVRLYCRLHSLYTPVIKDRDYHLKTYKSV
LPGSKLVDWLLAQGDCQTREEAVALGVGLCNNGFMHHVLEKSEFKDESQYFRFHADEEME
GTSSKNKQLRNDFKLVENILAKRLLILPQEEDYGFDIEEKNKAVVVKSVQRGSLAEMAGL
QVGRKIYSINEDLVFLRPFAEVESILNQSFCSRRPLRLLVAIKAKEIIKVPDHPEALCFQ
IRGAAPPCVYAVGRGSEAAAAGLCAGQCILKVNGNNVVSDGAQEVLEHFQAFRNHQEEAL
GLYQWVYHTHEDAQEARASQEAPGEDPQSDSAFPLMSLGPQLSLHEDSPVVTLTVDNVHL
EHGVVYEYVSTAGVKCHVLEKIVEPRGCFGLAAKILKAFAADDSVFVQNCGRLMALNNNI
KTMSHYEFRNICDTKLESIGQRIACYQEFAAQLKSRVSPPFKQASPEPHPLCGLDFCPTN
CHVNLMEVSYPKTTPSVGRSFSIRFGRKPSLIGLDPEQGHLNPMSYTQHCITTMAAPSWK
CLPAADGDLQQQVLNDSGFGSASETASQEDRGLSFLLKQEDREIQGAYRQLFTKLDVALK
EMKQYVTQINRLLSTITEPTSGGSCDPPLAEEASSPPLVSDESEMDRADHGGIKKVCFKV
SEEEQEDSGHDTMSYRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMRIP
SDKQDKLHGCLEHLFNQVDSIHALLKGPVMSRAFEETKHFPMDHSLQEFKQKEECTVRGR
SLIQISIQEDPWNLPNSIKTLVDNIQRYVEGELNQLLLALLKCTDTELQLRRDAVFCQAL
VAAVCTFSEQLLAALSFRYNNNGEYEDSSRDASRKWLEQVAATGVLLHCQSLLSPAAVKE
ERTMLEDIWVTLSELDNVTFSFKQLDENYVANTSVVYHVEGSRQALKVVFYLDSYHFSKL
PSRLEGGASLRLHTVLFTRALENVEGPPPPGSQAAEDLQQEINAQSLEKVQQYYRKLRAF
YLERSNLPTDASTTAVKIDQLIRPINALDELCRLMKSFVHPKPGASGSLGAGLIPISSEL
CYRLGACQIAMCGTGMQRSTLSVSLEQAAILARSHGLLPKCIMQATDIMRKQGPRVEILA
KNLRVKDQMPQGAPRLYRLCQPPVDGDL
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggagggacccggcggtagcgatcccagcggcgacggggctggggacggtgcccacccg
gacccccgggtccccagcgccgctgcgcccagctccggcccgtgcgcggccgcgcgggag
tcggagcgccagctgcgcctccgcctctgcgtcctcaacgagatcttgggcaccgagagg
gactacgtgggcaccttgcgcttcttgcaatcggccttcctgcatcgcatccggcagaac
gtggcggactcagtggagaagggcctcaccgaggagaacgtcaaggtcctgttctcaaac
atcgaagacatcttagaagttcataaggatttcttggctgccttggagtactgtttacat
cccgagcctcagtctcagcatgaactcgggaacgttttcttaaaattcaaggacaagttc
tgtgtgtatgaggagtactgcagcaaccacgagaaggccctgcggttgcttgtggagctc
aacaagatccccactgtgcgagccttccttttgagctgcatgctcctgggaggccggaag
accacggacatccctctggagggctacctgctgtctccgattcagaggatctgcaaatac
ccgctccttctcaaggagctggccaagaggacccctggcaagcacccggaccaccccgcg
gtccagagcgccctgcaggccatgaagaccgtgtgctccaacatcaacgagaccaagcgg
cagatggagaagctggaggcgttggagcagctgcagtcccacatcgagggctgggagggc
tccaacctcacagacatctgcacccagctcctcctgcaagggactttgttaaaaatctcc
gctggcaacatccaggagagggccttcttcctctttgacaacctccttgtctactgcaag
cggaaatccagggtcaccgggagcaagaaatccaccaagaggaccaagtccatcaatggc
tccctctacatcttcaggggtcgaatcaacactgaggtcatggaggtggagaatgtggaa
gacgggacagcggattaccacagcaacggctacactgtcaccaacggctggaagattcac
aacacggcgaaaaacaagtggttcgtctgcatggccaagaccgcagaggagaagcagaag
tggctggacgccatcatccgtgagcgggagcagcgcgagagcctgaagctcggcatggag
cgggacgcctacgtcatgattgcagagaagggagagaagctttaccacatgatgatgaac
aagaaggtgaacctgatcaaggaccgtcggagaaaactgagcaccgtccccaagtgcttc
ctcggcaatgagtttgttgcctggcttctggaaattggtgaaatcagcaagactgaagaa
ggcgtgaacttgggccaggccttgttggagaacggtataatccaccatgtgtctgacaag
caccagttcaagaacgagcaggtgatgtaccgcttccgttatgacgacggcacctacaag
gcccggagtgagttggaggacatcatgtccaagggcgtgaggctttactgccgccttcac
agcctctacacccccgtaatcaaagaccgtgattaccacctgaagacgtacaagtccgtg
ctgcctgggagcaagctcgtggactggctgctggctcagggtgactgccagacgcgggag
gaggcggtggcgcttggcgtgggcctgtgtaacaatggcttcatgcaccacgtgctggag
aagagtgagttcaaggatgagtcccagtacttccgcttccacgcagacgaggagatggag
ggaaccagcagcaagaacaaacagcttcgcaacgacttcaagctggtggagaacatcctg
gccaagcgcctgctgatcctgccccaggaggaggactatggctttgacatcgaggagaag
aacaaagccgtggtggtgaagtcagtccagcggggctcgctggctgagatggccggcctg
caggtggggaggaagatctactccatcaacgaggatctggtgttcctgaggccctttgcg
gaggtggagtccatcctcaaccagtctttttgctcccgccgcccactgcgcctcctggta
gccatcaaggccaaagagatcatcaaagttcccgaccatccagaggctttgtgcttccag
atccgtggagctgccccgccgtgcgtctatgctgtgggcagaggctccgaggctgctgcc
gcagggctctgtgccggccagtgcatcctcaaggtcaatggcaacaacgtggtgagcgat
ggcgcacaggaggtcctagagcacttccaggcattccggaaccaccaagaagaggccctg
ggtctgtaccagtgggtctaccacacccatgaggatgcccaggaggcccgagccagccag
gaggcccccggtgaggacccgcagtccgactcagccttccccctgatgtccctggggccc
cagctgagcctgcatgaagacagccctgtggtcaccttgactgtggacaacgtacacttg
gagcatggcgtggtgtatgagtatgtcagcaccgcaggcgtcaagtgccacgtgctggag
aagatcgtggagccccgtggctgcttcggcctcgctgccaagatcctcaaggcctttgct
gccgatgacagtgtctttgtgcagaactgtgggcggctcatggccctgaacaacaacatc
aaaaccatgtcccactacgagttccgcaacatctgtgacaccaagctggagagcatcggc
cagaggattgcctgctaccaggagtttgcagcccagttgaagagcagggtcagcccaccc
ttcaaacaagcatccccggaaccccatccgctgtgtggcctggacttctgccccaccaat
tgccacgtcaacctcatggaagtgtcctaccccaagaccactccctcagttggcaggtcc
ttcagtatccgttttggtcgtaaaccctccctcatcggccttgaccccgagcaaggccac
ctgaaccccatgtcctacacccagcattgtatcaccaccatggctgccccatcctggaag
tgcctgcctgctgcggacggggacctccaacagcaggtcctcaacgacagcggctttggg
tctgccagtgaaacagctagccaggaggaccggggcctgagcttcctactcaaacaggag
gaccgtgagatccagggagcctaccggcaactcttcaccaaactggacgtggccttgaag
gagatgaagcagtatgtcacccagatcaacaggttgctatccaccatcacggagcccacc
tccggtgggtcctgtgatccccccttggccgaggaggcctcatcccccccgctggtcagt
gacgagagcgagatggacagggccgaccatggaggcatcaagaaggtgtgtttcaaggtg
tctgaggaggaacaggaggactcgggccatgacaccatgagctaccgtgactcctacagc
gagtgtaacagtaaccgggactcggtcctgtcctacaccagcgtgagaagtaacagctcc
tacctgggcagtgacgagatggggtctggggatgagctgccctgtgacatgcggatcccg
tcagacaagcaggacaagcttcacggttgcctggagcatctctttaaccaggtggactcc
atccacgcactcctcaaggggccagtcatgagcagggcttttgaagagaccaagcatttc
cccatggaccacagcctgcaagagttcaaacagaaagaagagtgtacagtccgtggccgc
agcttgatccagatcagcatccaggaggacccttggaaccttcccaactccatcaagacc
ctggtggacaacattcagagatacgtggaaggtgagttgaaccagctgctcctggccttg
ctgaaatgcacagacaccgagctgcagctgcggcgggacgccgtcttctgccaggccctg
gtggccgcagtgtgcaccttctccgagcagctgctggcggccctcagcttccgctacaac
aacaacggcgagtatgaggacagcagccgggatgccagccgcaagtggctggagcaggtg
gcggccaccggcgtccttctgcactgccagtccctgctgtcgccagctgccgtgaaggag
gaacggaccatgctggaggacatctgggtgaccctgtcagagctggacaatgtcaccttt
tcctttaagcagctggatgagaactacgtggccaacaccagcgtcgtctaccacgttgag
ggcagtcggcaggcgctgaaggtcgtcttctacctcgacagctaccacttctccaagctg
ccctcccgcctggagggcggagccagcctgaggctgcacaccgtgctcttcaccagagcg
ctggagaatgtggagggcccgcctcctccaggcagccaggctgcggaagatttgcagcag
gagatcaacgcccagtctctggagaaggttcagcagtattaccgcaaactcagggcattt
tacctggaacggtccaacctgcccacggacgccagcactacggcggtgaagatagaccag
ctgatacgccccatcaacgccctggacgagctctgccgcctcatgaagtccttcgtccac
cccaagcctggtgccagcgggagcttgggcgccggcctcatccccatctcctctgagctc
tgctaccgcctgggcgcttgccagatcgccatgtgtggcacgggcatgcagaggagcacc
ttgagtgtctccctggagcaggcggccatcttggctcggagccacgggttgctgcccaaa
tgcatcatgcaggccacggacatcatgcggaagcagggccccagggtggagattctggcc
aaaaacctccgggtcaaggatcagatgccccagggtgcaccgcggctctaccgcctctgc
cagccgccggtggatggagacctctga
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integrated database retrieval system
