Lutra lutra (Eurasian river otter): 125108656
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Entry
125108656 CDS
T08100
Name
(RefSeq) general transcription factor 3C polypeptide 2
KO
K15200
general transcription factor 3C polypeptide 2
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125108656
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125108656
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
ASA1
DSE1_N
WDR55
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
125108656
NCBI-ProteinID:
XP_047600747
LinkDB
All DBs
Position
9:complement(21643480..21667467)
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AA seq
911 aa
AA seq
DB search
MDTCGVGCVALGEAGPVGSMTVVDSPGQEVLNQLDVKASSETTSAEASREMSLPAPLPGF
EDSLGERRLPAEQESLSRLEQQDLSSEMSKVSKPRASKPGRKRGGSTRKGPKRPQQPNPP
SAPLVPGLLDQSNPLSTPMPKKRGRRSKAELLLLKLSKDLDQPESPPPKRPPEDFETPPG
ERPRRRAAQVALLYLQELAEELSTALPAPVSCPESPKVSSPAKPKKNRQQAACQGGEQED
DTARDEDFVLQVEAEDGEESEAPSESSSEPEPVVPQSTPRGSTSGKQKPHCRGMAPNGLP
NHIMAPVWKCLHLTKDLREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSV
QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAAASQYVALFSS
PDMNETHPLSQLHSGPGLLQVWGLGTLQQESCPGNRAHFVYGIACDHGCIWDLKFCPSGA
WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAMKPAIYKVQCVAT
LQVGSMQASDPSECGQCLSLAWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
AAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLMPYQDSREGRDHSSASSEAPN
PPKARTYAETVNHHYLLFQDTDLGSFHDLLHREPMLRMQEGEGHSQLCLDRLQLEAIHKV
RFSPNLDSYGWLVSGGQSGLVRIHFVRGLTSPLGHRMQLESRAHFSAMFQPSSPIKGPGF
PPTSHRLLPGP
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcggggtcggctgtgttgccctgggggaggccggccccgtggggagcatg
actgtggtagactctcctggacaagaggtgctaaatcagcttgatgtcaaggcctcttcc
gaaacaactagtgctgaggcttccagagagatgtctttgcctgcgcctttgcctggattt
gaggactctcttggtgagaggaggctccctgcagagcaagaaagcctctccagacttgaa
cagcaagatctttcttcagagatgtcaaaggtctcaaagcctagggcctcaaagcctggc
cggaagagaggtggtagcacacggaaaggccctaaaaggccccaacagcctaatcctcca
tcagcccctctggttcctggtctcttagatcaatccaaccctctatccacccccatgcct
aagaaacgaggtcgaaggtccaaggcagagctgctactgctgaagttgtccaaagaccta
gatcagccagagtctccacctccaaagaggccccctgaggactttgagacccctcctggg
gaacgaccccgccgaagggctgcccaagtggcacttctgtaccttcaggaattggccgaa
gagctctcaacggccctgcctgctccagtgtcctgtcctgagagccccaaggtgagcagc
cccgccaaaccgaagaaaaaccggcagcaggcagcctgtcaaggtggagaacaagaggat
gacactgcacgggacgaagactttgttctccaggttgaggctgaagatggagaggaaagc
gaggccccaagcgagagctcctctgaacccgagcctgtggtgcctcaaagcaccccgcga
ggatccacgtcagggaagcagaagccacactgccggggaatggctcccaatggcttacca
aatcacatcatggcccctgtttggaagtgcctccatctcaccaaggacctccgagaacag
aagcattcatactgggagtttgcagaatggattccgctggcctggaagtggcacttgtta
tctgagcttgaggcggctccctacctgccccaggaggagaagtctccactgttttctgtc
cagcgtgaaggacttccagaggacggcacactctaccgaataaacagatttagctcgatc
acagcacacccagagcgctgggatgtgtccttcttcacagggggacccctctgggctctg
gactggtgtccagtgccagagggggcagcagcttcgcagtatgtggcccttttctccagc
cctgacatgaatgagacacacccactgagccagcttcactcgggtcctgggctgctccaa
gtctggggccttgggaccttgcagcaagaaagctgtcctggcaacagggctcactttgtc
tatgggattgcttgtgaccatggctgcatctgggacctcaagttctgccccagtggagca
tgggaacttccaggcacccctcggaaggctcctctcctgcccaggttgggcctcttggct
cttgcctgctccgatgggaaggtgctgctgttcagtctcccccatccagaggccctgctg
gctcagcagcccccagatgcaatgaagcccgccatctataaggtgcaatgtgtggcaacc
ctccaggtggggtctatgcaagcttcggacccctctgagtgcggtcagtgccttagcctg
gcctggatgcccacccggccccaccaccacctggctgctggctactacaatggcatggtg
gttttctggaaccttcccactaactcacccctgcagcggatacggctctctgacggctcc
ttgaagctctaccccttccagtgtttcctagcccatgaccaggctgtgcgtacccttcag
tggtgcaaagctaacagtcatttccttgtctctgcggggagtgaccgcaaaatcaaattc
tgggaccttcgacgaccttatgaacccataaactctatcaagcgcttcttgagtacagag
ctggcctggctgctcccctacaatggtgtcactgtggctcaggacaactgctatgcctct
tatggactctgtgggattcattatattgatgctggttaccttggtttcaaggcctatttc
actgctcctcgaaaaggcactgtctggagtctttcaggatccgactggcttgggacaata
gccgcaggagatatatccggggagctcattgcggccatattgcctgatatggccctgaac
ccaataaatgtcaagcgacctgtagagcgaagattccctatatataaagcagatctgatg
ccatatcaggacagccgtgaaggtcgagaccattcttctgcttcatctgaggcccccaac
ccacccaaagctcgaacttatgctgaaactgtcaaccatcactacttgctctttcaagat
acagatttgggttccttccacgatctgctccacagggagccaatgctgcgcatgcaggaa
ggagaggggcattcgcagctctgcctggacaggctgcagctggaggcgattcacaaggtc
cgcttcagcccaaacctggactcctatggatggctggtatctgggggacagtccgggctg
gttcggatccatttcgtccgtggactcacctcaccactgggccaccgtatgcagcttgaa
agtcgagcccacttcagtgctatgttccagccgtcctccccgattaaagggcctggcttc
cctccaaccagccatcgccttctgcccggtccctag
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