Lutra lutra (Eurasian river otter): 125108670
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Entry
125108670 CDS
T08100
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125108670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125108670
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125108670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
DUF349
UvrD_C
MIF4G_like_2
Zn_ribbon_FGT1_2
COG2_C
DUF1421
Tautomerase_3
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125108670
NCBI-ProteinID:
XP_047600774
LinkDB
All DBs
Position
9:21606909..21628529
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQALAREQE
EKLLRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEDEDEEVALDGEEGGAGPEEERPEGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgtcccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctatgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctatggcagtcccggggctccaccacggtgtcttcggggggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtctatggcctgcagcgaaacctgcta
gtggagaacatcattgacatttacaagcaggagtcttcccggccactgcactccaaggct
gagcagcacctcatgtgtgaggagcacgaagaggagaagatcaatatctactgcctgagc
tgtgaggtgcccacctgctccctctgtaaggtcttcggcgcccacaaggactgcgaggtg
gccccgctgcccaccatttacaaacgccaaaagagcgagctcagtgatggcatcgcaatg
ctggtggcgggcaacgaccgtgtgcaagcagtgatcacgcagatggaggaagtgtgccag
accatcgaggacaacagccggaggcagaagcagttgctcaaccagaggttcgaggccctg
tgttccgtgctggaggagcgcaaggcagagctgctgcaggcgctggcccgagagcaggag
gagaagctgctgcgagtccggggtctcatccgccagtatggagaccacctggaagcttcc
tccaagctcgtggagtccgccatccagtccatggaggagccgcagatggcgctgtacctc
cagcaggccaaggagctgatcaataaggtcggggcgatgtcgaaagtggagctggcggga
cggcccgagccgggctacgagagcatggagcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgcttccggggaggacgaggatgaggaa
gtggcactggacggggaagagggaggcgcggggccagaagaagagcggccggaggggccg
gaaggcacaggcgggcactga
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integrated database retrieval system
