Lutra lutra (Eurasian river otter): 125108697
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Entry
125108697 CDS
T08100
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125108697
03041 Spliceosome [BR:
llv03041
]
125108697
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125108697
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125108697
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Motif
Other DBs
NCBI-GeneID:
125108697
NCBI-ProteinID:
XP_047600812
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All DBs
Position
9:53691108..53721640
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AA seq
404 aa
AA seq
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MKTTSAFLRPVYKSRYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVE
FYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGD
LSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL
GGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQ
TFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMIN
PVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFKHSLPHRG
WDQIMECSHLQDRMAVCCLISLQGTEWQGMKPSERGLHNLQPVA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaacctcagcttttctcaggccagtctacaaaagcagatatgtcggcaacctt
tccagagatgtgacagaagctctaattctccagctgtttagccaaattggaccttgtaaa
aactgcaaaatgattatggatgtaaggacagctggaaatgatccatattgttttgtggag
ttttatgagcatcgtcatgcagctgcagcactggctgctatgaatgggcggaagataatg
ggtaaggaagtcaaagtgaattgggcaacaacccccagcagtcaaaagaaagatacaagc
agtagtaccgttgtcagcacacagcgttcacaagatcatttccatgtctttgttggtgat
ctcagtccagaaattacaactgaagatataaaagctgcttttgcaccatttggaagaata
tcagatgcccgagtggtaaaagacatggcaacaggaaagtctaaaggatatggctttgtc
tcctttttcaacaaatgggatgccgaaaacgccattcaacagatgggtggccagtggctt
ggtggaagacaaatcagaactaactgggcaacccgaaagcctccagctccaaagagtaca
tatgagtcaaacaccaaacagctatcatatgatgaggttgtaaatcagtctagtccgagc
aactgtactgtatactgtggaggtgtcacttctgggctgacagaacaactaatgcgtcag
actttttcaccatttggacaaataatggaaattcgagtctttccagataaaggatattca
tttgttcggttcaattcccatgaaagtgcagcacatgcaatcgtttctgttaatggaact
accattgaaggtcatgtggtgaaatgctattgggggaaagaaactcttgatatgataaat
cctgtgcaacagcagaatcaaattggatatccacaagcttatggccagtggggccagtgg
tatggaaatgcacaacagattggccagtatatgcctaatggttggcaggtacctgcatat
ggaatgtatggccaagcatggaatcagcagggatttaaacacagtcttccgcaccgtgga
tgggaccaaattatggagtgcagccacctccaggacagaatggcagtatgttgcctaatc
agcctgcagggtaccgagtggcagggtatgaaacccagtgaaagaggactccataatcta
cagccagtggcttga
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