Lutra lutra (Eurasian river otter): 125108744
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Entry
125108744 CDS
T08100
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125108744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125108744
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
125108744
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125108744
NCBI-ProteinID:
XP_047600958
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Position
9:complement(40664890..40692649)
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREAEAPSSRGSPVRVKREVEPVSAR
EAPAPVVPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccggtccaagcgtgaatctcgtggttctacccgcgggaagcgcgagtccgag
tcgcggggcagctcgggtcgcgttaagcgggagcgagaccgggagcgggaggccgaggcg
ccgagctcccggggcagcccagtgcgtgtgaagcgggaggtcgagccggtgagcgcgcgg
gaggccccggcgcccgtagtcccggctgtgcgggtgaagcgggagcgcgaggctgacgag
gactctgagcctgagcgggaggtgcgagcaaagaatggccgtgtggattccgaggaccgg
aggagtcgccattgcccctacctggataccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcacatatcaatgcatatgcctgtcttgtgtgtggc
aaatactttcagggccggggtttgaagtctcatgcctacattcatagcgtccagtttagc
caccatgtcttcctcaacctccacaccctcaagttctactgccttccagacaactacgag
atcatcgattcctcactggaggatatcacatatgtgttgaaacccactttcacaaagcag
cagattgcaaacttggacaagcaagccaagttgtcccgggcgtatgatggtaccacttac
ctgccaggcatcgtgggcctgaataacataaaggccaacgactatgccaacgctgtcctt
caggctttgtctaatgttcctcctctccggaactacttcctggaagaagacaattataag
aacataaagcgtcctccgggggatatcatgttcctgttggtccagcgttttggagaactg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtctctccccatgagatgctg
caggctgttgtcctttgcagcaagaagaccttccagatcaccaagcagggggatggagtt
gactttctgtcctggtttctgaatgctctacactcagcgctggggggcacaaagaagaaa
aagaaaactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
cctcatcctgatctgccagcagaagaaaaagagcagctgctgcataatgacgagtaccag
gagacaatggtggagtccaccttcatgtacctgacgctggatctccctactgctcccctc
tacaaggacgagaaggagcagctcatcatccctcaggtgccgcttttcaatatcctggcc
aagttcaacggcatcacggagaaggaatataagacctacaaggagaactttctcaaacgc
ttccagcttaccaagctgcctccatatctcatcttttgtattaagagattcactaaaaac
aatttctttgtggagaagaatccaactattgtcaacttccccattacaaatgtggatctg
agagagtacctgtctgaggaagtacaagcagtgcacaagaataccacgtacgacctcatt
gccaacattgtccatgacggcaagccctcggagggctcctaccggatccatgtgcttcat
cacgggacgggtaaatggtatgaattacaagacctgcaggtgactgacatccttccccag
atgatcacgctttcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcttga
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