Lutra lutra (Eurasian river otter): 125108755
Help
Entry
125108755 CDS
T08100
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125108755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125108755
Transcription factors [BR:
llv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125108755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
125108755
NCBI-ProteinID:
XP_047600983
LinkDB
All DBs
Position
9:82338510..82492011
Genome browser
AA seq
818 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
EVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHL
PSDVMDQNLLNFLPEQEHSEVYKMLSSHMLVTDSPSPEYLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDSTLSRPCRVPLGKEVCFIATVRLATPQFLKE
MCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVER
RQELALEDPPPEAVHPAALKDKSSSLDPQQHFNALDVGTLGLNTSHSPSASSRSSHKSSH
TAVSEPASTPSKLMAEASATTLPRSATLPQELPVPGLSQAASMPAPLPAPSSCDLTQQLL
PQTILQSPPAPMTQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDS
NIQMFLQQPAVSLSFSSVPRPEGQQQVQQRSAPGSQPQLVTSPQLPGQIASAQVANQHLL
RESSVISTQGPRPMRSSQMMQGSGHSVSSLTPQFSSAAAVLPPALSLTTLASASQDGSQC
QPSPDFSHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYPQSQAVFPNADMHTT
SSSASPPVLLMGQAVPQPSFPASRQSPLQPAQAQQQPQHFLQVQAPTSLHSEQQDSILLS
TYSQQPGTLGYPPPPQSSRPPRRVSSLSESSGLQQPPR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaagacagggcaaagagagcttctcgaaacaagtctgagaagaag
cgtcgggaccagttcaatgttctcatcaaagaacttagctccatgctccctggcaatacg
cggaaaatggacaaaaccaccgtgctggaaaaggtcattggatttttgcagaaacacaat
gaagtctcagcgcaaacggaaatctgtgatattcagcaggactggaaaccttcattcctc
agtaatgaagaattcacccagctgatgttggaggcactggatggcttcatcatcgcagtg
acaacggatggcagcatcctctatgtttctgacagtatcacgcctctccttgggcattta
ccgtcagatgtcatggatcagaatttgttaaatttccttccagaacaagaacactcagaa
gtgtataaaatgctttcttcccatatgcttgtgacagattccccctccccagaatactta
aaatctgacaacgatttagagttttattgccatcttcttagaggcagcttgaacccaaag
gaatttccaacttatgaatacataaaattcgtaggaaattttcgctcttacaacaatgtg
cctagcccctcttgtaatggctttgatagcaccctttcaaggccctgccgggtgccgctg
ggaaaggaggtctgcttcatcgccaccgttcgcctggcaacgccccaattcttaaaggaa
atgtgcatagttgacgaacccttagaggaattcacttcaaggcatagtttggaatggaaa
tttttatttctggatcacagagcccctccaatcataggatacctgccttttgaagttttg
gggacctcgggctatgactactaccacattgacgatctggagctcctggccaggtgccac
cagcacttgatgcagtttggtaaagggaagtcctgttgctaccggtttctgaccaaaggg
cagcagtggatttggctgcagacacactactacatcacgtaccaccagtggaactccaag
cccgagttcatcgtgtgcacacactcggtcgtcagttatgcggatgtccgggtagaaagg
aggcaggagctggctttggaagacccaccgcccgaggccgtccaccctgcggcactaaag
gacaagagctccagcctggaccctcagcagcactttaatgcacttgacgtgggcaccttg
ggccttaacaccagtcactcgccatcagcgtcctccagaagttcccacaaatcctcgcac
acggccgtgtcagaacccgcctctactccaagcaagctgatggcagaggccagtgccacc
actttgccaagatcagccacgctgccccaagagctccccgtgccagggctcagccaggca
gcctccatgccggctcccctgccagccccgtcgtcctgtgacctcacacagcagctcctg
cctcagaccatcctgcagagcccccctgcccccatgacacagttctcagcgcagttcagc
atgttccagaccatcaaagaccagctggagcagcggacacggatcctgcaagccaacatc
cggtggcagcaggaagagctccacaagatccaggagcagctctgcctggtgcaggactcc
aacatccagatgtttctgcagcagccagctgtatccctgagcttcagcagtgtcccgaga
cccgagggtcagcagcaagtccagcagaggtcggccccaggctcccagccccagcttgtg
accagccctcagcttcccgggcagatcgcttctgcccaggtggcgaaccagcacctgctc
agagaatccagtgtgatatcgacccaaggtccaaggccaatgcgaagctcgcagatgatg
caaggaagtggccactcagtgagcagcttgacgccccagttcagcagcgccgcggcggtg
ctcccaccagctctgagcctgaccacgctcgcttctgcctcccaggatggcagccagtgc
cagcccagcccagacttcagccatgaccggcagctcaggctattgctgagccagcccatc
cagcccatgatgcctgggtcctgtgatgcgaggcagccctcagaggtcagcaggactgga
cggcaagtcaagtatccacagagccaggccgtgtttccaaatgcagacatgcacaccacc
agcagcagcgcctcgccccctgtcctgctgatgggacaggcggtgccccagcccagcttc
cccgcctccaggcagtcacccctgcagcccgcacaggcccagcagcagccacagcacttc
ctgcaggtgcaggcaccaacctctctgcacagtgagcaacaggactccatacttctctcc
acctactcgcaacagccagggaccctgggctaccccccaccaccccagtcctcacgccct
ccccgaagggtcagcagcctctctgagtcctcgggcctccaacagccaccccggtag
DBGET
integrated database retrieval system
