Lutra lutra (Eurasian river otter): 125108864
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Entry
125108864 CDS
T08100
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04140
Autophagy - animal
llv04148
Efferocytosis
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125108864
04148 Efferocytosis
125108864
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125108864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125108864
Membrane trafficking [BR:
llv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125108864
Hops complex
125108864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
125108864
NCBI-ProteinID:
XP_047601187
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All DBs
Position
9:complement(114821541..114848971)
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQSAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGHFVDLSLHDTVTTLVLGGHSKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVS
PEQKVKALLLVGDVAQAADVAIEHRNEAELTLVLSHCTGATDAATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgcttggggactctgccttttaccggaagtat
gagctgtacagcatggactgggacctgaaggaggaactcagggactgcctggtagctgct
gcgccctatgggggccccattgcactgttgaggaacccgtggcggaaggagaaggcggcc
agtgtccggccggtgcttgagatctactccgcctccggcctgcctctggccagtctgctg
tggaagagcgggcccgtggtgtcactaggctggtcagccgaggaggagctgctctgcgtg
caggaagatggtgtggtgctggtttacgggcttcacggcgacttccggaggcacttcagc
atgggcaatgaggtgctccagaaccgcgttctagacgctcggatcttccatactgagttt
ggttcgggggtggccatcctcacgggggcccaccgctttaccctcagcgccaatgtgggt
gatctcaagctccgccggatgccggaggtgccaggtctgcagagcgcaccctcatgctgg
accacactgtgccaggaccgagttgcacacattcttctggctgtggggcctgatctttac
cttctcgaccatgcagcctgctcggcagtgacgccccctggcctggcgcccggagtgagc
agctttctgcagatggcagtctccttcacctaccgacacctggccctcttcacagacaca
ggctatatctggatggggacggcatcactcaaggagaagctgtgcgagttcaactgcaac
atccgggcccccccgaagcagatggtctggtgcagccgtcctcgcagcaaagagagggct
gtcgtggtggcctgggagagacggctgatggtggtgggtgatgcacctgagagcatccag
tttgtgctggatgaagactcctacctagtgcctgagctggatggggtccgcatcttctct
cgcagcactcatgagttcctgcatgaggttccagtggccagcgaggagatcttcaaaatt
gcctccatggctcctggagcactgttgttggaggcccagaaagagtatgagaaagagagc
cagaaggcagatgagtacctccgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggctgcgggacatgagcaccggccagacatgcagaagagtttgctc
agggcggcctcctttggaaagtgtttccttgacagatttccaccggacagcttcgtgcgc
atgtgtcaggacctgcgtgtactcaatgccatccgggattaccacatcgggatccccctc
acttacagccaatataaacagctcaccatccaggtgctgctggataggctggtgttacgg
aggctttaccctctggcgatccagatctgtgagtacctgcgccttcctgaagtgcagggt
gtcagcaggatcctggctcactgggcctgctacaaggtgcaacaaaaggatgtgtccgat
gaggatgtcgctcgggccattaaccagaagctgggggacacaccaggcgtctcttactct
gacatcgctgcacgggcctatggctgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctccggggagcaggtaccccttctcctaaagatgaagagaagcaaactg
gccctgagcaaggccatcgagagtggggacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctaaaccgaggagattttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaagcaccaggagctggagacactgaaggacctttac
aatcaggatgacaaccatcaggagctgggcagtttccacatccgagccagctatgctgct
gaggagcgtatcgagggacgagtggcagctctgcagtcggcggctgacgccttctacaag
gccaagaatgagttcgcagccaaggccacggaggatcaaatgcggctcctgcggctgcag
cggcgcctggaagacgagttggggggccacttcgtggacctgtctctgcatgacacagtc
accacccttgtccttggcggccacagcaaacgtgcggagcagctggcacgtgacttccgc
attccagacaagaggctctggtggctgaagctgaccgcgctggcagatctggaagactgg
gaggagctagagaagttttctaagagcaagaaatcgcccattggctacctgccctttgtc
gagatctgcatgaaacaacacaacaaatatgaggccaagaagtatgcctcccgtgtgagt
cccgagcagaaggtcaaggccttgcttcttgttggggatgtagctcaggctgcggatgtg
gccattgaacaccggaacgaagcagagctgacacttgtattgtcccactgcactggagcc
acggacgcagccacagctgacaagattcagcgggctagggcacaagcccagaagaagtaa
DBGET
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