Lutra lutra (Eurasian river otter): 125109026
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Entry
125109026 CDS
T08100
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04517
IgSF CAM signaling
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125109026
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125109026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125109026
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125109026
Intermediate filaments
Intermediate filament-binding proteins
125109026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
125109026
NCBI-ProteinID:
XP_047601564
LinkDB
All DBs
Position
9:complement(67712650..67912703)
Genome browser
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIQ
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDTLHEQAGALPQEHAESPDVRGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHNMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRRRLADLKELWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACDGRRARLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEETESQQQWDTSKGDQVSQNGLPAEQGSPRMAETGDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSIFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggatgactgggacaatgagaacagctctgcgaggctcttt
gagcggtcccgcatcaaggctctggcagatgaacgcgaagctgtgcagaagaagaccttc
accaagtgggtcaattcccacctggcccgagtgtcctgccggatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaagtcctctccggagagaggctg
cctaaacccaccaagggacgaatgcgcatccactgtctagagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatgggctcccatgacatcgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcttgcgcttccagatccag
gatatcagtgtagagacggaagacaacaaagagaagaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctgggtacccgaacgtcaacattcacaatttcaccaca
agctggagggatggcatggccttcaacgcactgatacacaaacaccggcctgacctgata
gattttgacaagctaaagaaatccaatgcacactacaatctgcagaatgccttcaacctg
gcagagcagcaccttggcctcactaaactgttggatccggaagatatcagtgtggaccac
cctgatgagaagtccattatcacttatgtggtgacctattaccactacttctctaagatg
aaggccttagctgttgaaggaaaacgaattggaaaggtgcttgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgagtcacttgcctctgaccttctggagtggattgaacaa
accatcattatcctcaacaatcgcaaatttgccaattctctggttggggttcaacaacag
cttcaggccttcaacacttaccgcactgtggagaaaccgcccaagtttactgagaagggg
aacttggaagtgctgctttttactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccccgggagggcaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcagaacatgagcgagaactggctctgcggaacgagctcatcagacaggagaaactg
gaacagctcgcccgcagattcgaccgcaaagcagctatgagggagacctggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggttttgaccttcctgcagttgaggccgcc
acgaaaaagcatgaggccattgagacagacattgccgcatacgaggagcgtgtgcaggct
gtggtcgctgtggccagggagctcgaggcggagaactaccatgacatcaagcgcatcaca
gcaaggaaagacaatgtcattcggctctgggagtacctactggaattgctcaaggcccgg
agacagcgtctcgagatgaacctggggttgcaaaagatattccaggaaatgctctacatt
atggactggatggacgaaatgaaggtgctattactgtctcaagactatggcaaacacttg
cttggcgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgtgtgagaggtgtcaatgcttctgcccagaagtttgcaacagacggggaaggt
tacaagccctgcgaccctcaggtgatccgcgaccgcgtggcccacatggaattctgttac
caagaactctgccagctggcagctgagcgccgtgcccgtctggaagagtcccgccgcctc
tggaaattcttctgggagatggcggaagaggagggctggatacgggagaaggagaagatc
ctgtcctccgacgattacgggaaggacctgaccagtgtcatgcggctgctcagcaagcac
cgggcgttcgaggatgagatgagtggccgcagtggccactttgagcaagccatcaaagaa
ggtgaagacatgatcgcggaggagcacttcgggtcagagaagatccgagagaggatccag
tacatccgggagcagtgggccaacctggagcagctctcggccattcgcaagaagcgcctg
gaggaggcctcgctcctgcaccagttccaggcggatgccgacgacatcgacgcttggatg
ctggacatcctcaagattgtctccagcaacgatgtgggccacgacgagtactccacacag
tctctggtcaagaagcacaaggacgtggcggaggagatcgccaactataggcccaccatc
gacacgctgcacgagcaggccggtgccctgccccaggagcacgccgagtctccggacgtg
aggggcaggctgtcaggcattgaggagcggtacaaggaggtggccgagctgacacggttg
aggaagcaggcgctgcaggacaccctggccttgtacaagatgttcagtgaggctgacgcc
tgtgagctctggatcgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagattcgagagccttgaaccggaaatgaacaac
caggcttcccgggttgctgtggtgaaccagattgcacggcagctcatgcacagtggccac
ccaagtgagaaggaaatcaaagcccagcaggacaaactcaacacgaggtggagtcagttc
cgagagctggtggacaggaagaaggacgctcttctctctgccctgagcatacagaactac
caccttgagtgcaatgaaaccaaatcctggattcgagagaagaccaaggttatcgagtcc
acccaggacctgggcaacgacctggccggcgtcatggccctgcagcgcaagttgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaagaggccgag
aaactcgagtccgagcaccccgaccaggctcaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccaccctgaaaaaccgcgaggcctctctgggagag
gccagcaagctgcagcagtttctgcgggacctggacgacttccagtcctggctctcccgg
acccagacggccatcgcctctgaggacatgcccaacaccctgaccgaggcagagaagctc
ctcacacagcacgagaacatcaaaaacgagattgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggacagaccgacgcccagtacatgtttctg
cggcagcggctgcaggccctggacactgggtggaatgagctccacaaaatgtgggagaac
agacagaatctcctctcccagtcacatgcctaccagcagtttcttagggacacgaagcag
gccgaggccttccttaacaaccaggagtatgttttggcccacactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggacgcc
aatgaggagaagatcaatgctgttgtggagacgggccggaggctggtgagcgatgggaac
atcaactcagatcgcattcaggagaaggtggactccatcgatgacagacatcggaagaat
cgtgaggcagccagtgagcttctgatgagattgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctatctctctggatcaatgaaaagatgctcaccgcccaggac
atgtcttatgatgaagccagaaatctacacagtaaatggttaaaacatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaagggatgcagctc
atttcagaaaagcccgagacggaagctgtggtaaaagagaaactcactggtttacataac
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgtgcagatctggacaaatggctgcatggcctggag
agtcagattcagtctgacgactatggcaaagatctgaccagcgtcaacatcctgcttaaa
aagcaacagatgctggagaaccaaatggaggtgcggaagaaggagattgaggagctccag
agccaggcccaggccctgagtcaggaggggaagagcactgacgaggtagacagcaagcgc
ctcaccgtgcagaccaagttcatggaactgctggagcccttgaatgagagaaagcataac
ctgctggcctccaaagagatccatcagttcaacagggacgtggaggacgagattttgtgg
gttggagagaggatgcctttggcaacttccactgatcacggccacaacctccagactgtg
cagctattaataaagaaaaaccagaccctccaaaaagagatccagggacaccagcctcgc
atcgatgacatctttgagaggagccaaaacattgtcaccgacagcagcagcctcaatgcc
gaggccatccggcgaaggctcgctgacctcaaggagctgtggggcctcctcatcgaggag
accgagaagcgccacaggcggcttgaggaggcacacagggcccagcagtactactttgac
gcagccgaggcggaggcctggatgagtgagcaggagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttaaagaagcaccagattctggaacaagcc
gtggaggactatgcagagaccgtacatcagctctccaagaccagccgggccctggtggct
gacagccatcctgaaagtgagcgcatcagcatgcggcagtccaaggtggataagctgtat
gctggcctgaaagacctcgccgaggagcggaggggcaagctggatgagaggcacaggctc
ttccagctcaaccgggaggtggatgacctggagcagtggatcgccgagagagaggtggtc
gcagggtcgcacgagctggggcaggactacgagcacgtcacgatgttacaagaacgattc
cgggaatttgcccgagacaccgggaacattgggcaggaacgcgtggacacggtcaatcac
atggccgatgaactcatcaactctgggcattcagatgctgccaccatcgctgagtggaag
gatgggctcaacgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
ctcgccgcctcctatgaactgcacaagttttaccatgacgccaaggagatctttgggcgc
atccaggacaaacacaagaaactccccgaggagcttgggagagatcagaacacagtggag
accttacagagaatgcacaccacattcgagcatgacatccaggctctgggcactcaggtg
aggcagctccaggaggatgcggctcgtctccaggcagcctatgcaggtgacaaggctgac
gacatccagaagcgggagaatgaggtcctagaagcctggaaggctctgctggatgcctgt
gatggccgcagggcacggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgtgacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagccc
agggatgtatcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatc
gatgctcgtaatgacagtttcacaacctgcattgaacttggcaaatccctgctggcgaga
aagcactatgcatctgaggagatcaaagaaaagttattgcagttgacagaaaagagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccac
cagttctcacgggacgccagtgtggctgaggcctggctgcttggacaggagccctaccta
tccagccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccacgag
gcttttgagaagtctgctgccacctgggacgagaggttctctgccctggagaggctgaca
acgttggagttactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccg
ccctctcccgagccgagcacgaaggcttctgaggagactgaatcccagcagcagtgggat
acttcaaaaggagatcaagtttcccagaacggtttgccggctgaacagggatctccacgg
atggcggaaacgggggacacaagtgaaatggtcaacggcgctgcagagcagagaacgagc
tcaaaggagtccagccccatcccctcccccacctcggaccgcaaagccaagactgccctc
ccggcccagagtgctgccaccttgccggccagaacccaggagacgccttcagcccagatg
gaaggcttcctgaatcggaagcatgagtgggaggctcacaataagaaagcctcaagcaga
tcctggcacaatgtttattgtgtcataaataaccaagaaatgggtttttacaaagatgca
aagacagctgcctctggaatcccctaccacagcgaggtccctgtgagtttgaaagaagcc
atctgtgaagtggcccttgattacaagaagaagaaacacgtgttcaagctgagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccag
gccatctcctctgccatctcctccgataaacacgaggtgtccgccagcacccagagcacg
ccagcatccagccgggcacagaccttgcccaccagcgttgtcaccatcaccagcgagtct
agccctggcaagcgggagaaggacaaagagaaagacaaggagaagcggttcagcattttt
ggcaaaaagaaatga
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integrated database retrieval system
