Lutra lutra (Eurasian river otter): 125109065
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Entry
125109065 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125109065
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125109065
Spliceosome [BR:
llv03041
]
Complex C
Other components
Complex C specific factors
125109065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
ABC_tran
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
125109065
NCBI-ProteinID:
XP_047601649
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All DBs
Position
9:123621073..123685587
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AA seq
703 aa
AA seq
DB search
MAAPVGPVKFWRPGTEGPGVSISEERQSLAENSVTTVVYNPYAALSVEQQRQKLPVFKLR
NHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRV
AEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHE
RTLYTDIAIGLLKKIQRKRGDLRLIVASATLDAEKFRDFFNQNETNDPTRDTCVILTVEG
RTFPVDIFYLQSPVPDYIRSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA
LGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDC
GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG
MRIAEFPLNPMFAKMLLASGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAV
EEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE
GDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKVQDQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgtgggaccggtgaagttctggcgacccggtaccgagggaccaggtgtc
agcatctctgaggagagacagagtctagctgaaaactctgtaacaactgttgtctacaat
ccctacgctgccctttctgtcgagcagcagaggcagaagctgcccgtgttcaagcttagg
aatcatatattatacttggtagaaaactatcagacagtggtgattgttggagagacggga
tgtgggaaaagcacacagatcccacagtaccttgcagaagcgggctggaccgccgaagga
agagtggtgggagtgacccagcctcgaagagtggctgccgttacagttgcagggagagta
gctgaggaaaggggtgcggtgctgggccacgaggtgggctactgcatccgctttgacgac
tgcaccgacccgctggccacgagaatcaagttcctgactgatggaatgttggtcagggaa
atgatggttgatccattgttaacaaaatatagtgccatcatgctggatgaagcccacgag
aggaccttgtacacagacattgccattggcttgctgaaaaagattcagagaaagcgaggg
gatcttcgattaattgtagcttcagccactctggatgcagagaaatttcgggatttcttt
aatcagaatgaaaccaatgacccaacgagggatacttgtgtgatccttacggtagaagga
cgaacattcccagtggatatcttttatctacaaagtcctgttccagattatataagatca
actgtagaaactgtgatgaaaattcaccagacagagggagatggagacatactagcattt
ctgactggccaggaagaggtggaaactgtcgtgtctatgctgattgagcaggctcgggcg
ctaggtcgaactgggatgaagagacacctccgggttctccccatgtatgcaggactgcct
tcctttgagcaaatgaaggtgtttgaaagggtgtcccgcagcgtccgaaaggtgatagtg
gccaccaatgtggccgaaacctccattacaatcagcgggattgtgtatgtgatcgactgt
ggcttcgtgaaactccgagcctacaatcccaggacggccatcgagtgcttggtggtggtt
ccggtgtcccaggcgtcagccaaccagcgcgcgggacgtggtggccgcagccgctctgga
aaatgttaccgcctttatacagaggaagcctttgacaagctgcctcagagtaccgtccct
gagatgcagcgtagcaatctggcgcctgtcatcctccagctgaaagcgctcgggatcgac
aacgtcctcaggttccacttcatgtcgccccccccagcccagtcgatggttcaagcattg
gagttactctatgctctgggaggtctggacaaagactgtcgcctaactgaacctcttggc
atgagaatcgcagagtttcctttgaaccccatgtttgcaaaaatgctgcttgcatcagga
aattttggctgttctcaggaaattctaagcattgcagccatgatgcaaatccagaatatc
tttgtggtcccctcaaaccagaagtctcaggcaattcgagtgcaccgaaaatttgctgtg
gaagagggtgatcatctcacgatgctcaatgtgtatgaagcgtttatcaaacacaataaa
aactctcagtggtgtcaggaacatttcctgaattacaagggtcttgtcagagcggcaaca
gtgcgagagcagttgaagaagcttcttgtcaagtttcaagtgcccaagaaatctagcgaa
ggtgatccagatccagtcctgaggtgcattgtttcaggattctttgcgaatgcagcaaga
tttcattctactggagcttataggactatccgtgacgatcatgaattacatatccaccct
gcctcggtcctctacgcggagaagccgcctcgctgggttatctacaatgaagttatacag
acctccaagtattacatgagagacgtgactgctatcgaatccgcttggctgttggagctg
gctccccacttctatcaacaaggaacgcacctgtccctcaaagccaaaagggccaaggtc
caggaccagtga
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