Lutra lutra (Eurasian river otter): 125109264
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Entry
125109264 CDS
T08100
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125109264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125109264
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125109264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SPT8
WD40_like
WDR90_beta-prop_4th
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
UTP15_C
DUF6235
Zip
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
125109264
NCBI-ProteinID:
XP_047602041
LinkDB
All DBs
Position
9:22988260..23035218
Genome browser
AA seq
682 aa
AA seq
DB search
MAAGGRGVADPLSPAGVPCAFSPLNQAYFALASADGQLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKESPQRKKRKSEAIGTSNQIDLLAIGTAVGSILLYSTVKGELHSKL
ISGGHDNKVNCIQWHQDNGCLYSCSDDKYIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEIYRHFTGHATPVSTLIFTTVRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGNWFQPVIE
RVALNSKESHMCLVRDISNCWAPKVETAVTKVRTPVVNSEAKVLVPGVPGHHAAIKPAPP
QIEEVESKRKLGENEISIEERLGALDIDTKKEKDDLPQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGMTCPAQKAKLVYE
EESSEEESDDEIAEKDSDDNWDEDEEEKESEKDEDVDEENEEEEEDAEEKDEENGEEDRD
VASEKELNGDSDLDPENESEEE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggccgtggtgttgccgaccccctgtccccggcaggggttccgtgcgcc
ttctccccgctgaaccaggcctacttcgctttggcgtctgccgacggtcagttgcgagtg
tgggagaccgccaacaataggctgcaccaagagtacgtgccttccgcacacctcagcggt
acctgcacctgcctggcctgggcgccagcgcgactgcaggccaaggaaagtccccagagg
aaaaaaaggaaatcagaagctataggaacgagtaaccagattgacttgttggctattggt
acagcagttggtagtattttattatacagtacagtaaaaggagaattacacagtaaattg
ataagtggtggacatgacaacaaggttaattgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgataaatatattgtggaatggaatacacagacatgcaaagta
aagtgcaaatggaaaggcgacaatagcagtgtcagctccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactgtgggttttggagaccaaagaaatc
tacagacacttcacaggccatgcaacaccagtttcgacactcatcttcactactgtcaga
cctcctaatgagagccagccctttgatggaatcactggtctttatttcttgtctggagca
gtacatgaccggttactcaatgtctggcaggtccggtcagaaaacaaagaaaagaatgca
gtgatgtcttttacagttacagacgaacctgtctatattgatctgactttgtcagaaaat
aaggaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaa
cacatactaaatggatactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacccatccctattctagcagctggtttt
tgctcagacaaaatgtcactgttgctcgtatatggcaattggtttcagcccgtcattgag
cgagtggctttaaattccaaagaatctcatatgtgtttagtaagagatatttcaaactgc
tgggcccccaaagtagaaacagctgtaacaaaggtgagaacaccagtggtgaattctgaa
gcaaaagttctggtgccaggggtacctggtcatcatgcagctatcaagcctgctcctcca
caaattgaggaagtagagagcaagaggaaattgggggagaatgagattagcattgaagag
cgcttgggagcactggatatagatacaaagaaagaaaaggatgaccttccacagacaaat
agctttccagttcttctcacacagggtttagaaagtaatgatttcgaaatgctaaataaa
gtacttcaaactaggaatttaaacctaattaagaggactgtattaaggatgcccctgcat
gctgttattccattgttgcaagagcttacaaagagattgcagggacatcctaatagtgcc
gttttaatggttcagtggctaaaatgtgtgttaactgtccatgcatcctacttatccaca
ttgcctgatctggtaccccagctgggaacactgtatcagttaatggaaagcagagtaaaa
acttttcagaaactctcccaccttcatggaaagcttattcttctaatcactcaagttaca
gcatcagaaaaaacaaagggaatgacttgtcctgcacaaaaggcaaaattggtgtacgag
gaagaatcttctgaagaggagtcagatgatgaaattgcagagaaggactctgatgataac
tgggatgaagatgaggaagagaaagaaagtgaaaaagacgaggatgttgatgaagagaac
gaagaggaagaggaagatgccgaagagaaagatgaggagaacggggaggaggacagggat
gtggccagtgagaaagaattaaatggagattctgacttagatcctgaaaatgaaagtgaa
gaagaatga
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