Lutra lutra (Eurasian river otter): 125109471
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Entry
125109471 CDS
T08100
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
llv01009
]
125109471
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125109471
Protein phosphatases and associated proteins [BR:
llv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125109471
Membrane trafficking [BR:
llv04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
125109471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
YqzH
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
125109471
NCBI-ProteinID:
XP_047602420
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All DBs
Position
9:59196737..59308303
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTGDSHSLCVAPSLVTD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEEIDTDVVMKLADQMRMLNFPQWFDLLKEIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNRRTRELEEISQQKNATKDSSLDTEVAYLIHEGMFISDAFNENELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQTSSSATPGGVDIMVNEDMKLTDLELEKLANNIQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSMSL
LGALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKS
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMSEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccatagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccaacaaaacacattcgacctgtgcagtcactgccagatgtatgt
cccaaggaacccacaggtgattcacatagtttatgtgttgccccatctctagttacagat
caacatagatggactatatatcattccaaagtaaacctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtttat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtcctcct
aaagatacctttgacaggactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttctgaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaagatgcttcgagataagattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aacaattgtgttaaagtgtacaataaactcaagttaatggccactgtacaccagactcag
cctacagtgcaggtgttgttatccacttctgagtttgttggagctttggacttaatagca
acaacacaggaggttctacagcaggagcttcagggcattcacagcttccggcatttggga
tcacaactttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaacagaccactggaagatgattgtcaaattttagaagaggaa
agacttgtatctcttgtatttggacttttaaaacaaagaaagcttaattttttagaaatc
tatagtgaagaaatgattattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaagaaattgacacagatgttgttatgaagcttgcagatcagatgaga
atgttgaattttcctcagtggtttgatttgctaaaggagattttctctaagtttacaatt
ttcctacaaagagttaaggcaacgttaaatatcattcacagtgttgttctctcagttctt
gacaaaaaccgaaggaccagagaattggaggagatttcacaacagaagaatgctacaaaa
gacagttcactggacacagaggtggcttatttaatccatgaaggaatgtttataagtgat
gcgttcaatgagaatgaattaacacctatagcaatcgacactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattcggtatctgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatctgctactccaggaggtgtggatattatg
gtcaatgaagacatgaaattaactgatttagagctagaaaaactggcaaataatatccag
gagttattgtatagtgcttcagatatatgtcatgaccgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgagaagctaaattccatggaattcataacactttctaga
ttaatggaaacattcattttagatactgaacagatctgtggaagaaaaagtatgtcatta
cttggagcacttcagagccaagctaataaatttgtaaacaggtttcatgaagagagaaaa
actaagctcagcctcctcttagacaatgagcgctggaagcaagctgatgttcctgcagaa
tttcaggatcttgttgattctatatcagatggaaagattgctttacctgaaaaaaagtca
ggggctacagaagaaaggaaaccagcggaagttctcattgtcgagggacaacagtatgct
gtcgttggaactgtattgctgttgataagaattatccttgaatattgccagtgtgtagac
aatatcccatctgttactactgacatgcttactcgtctatcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatttggctctttcttcacgttgtttgcagttaattgtgcactac
attcctgtgatcagggctcattttgaagctcgactgcagcctaagcagtatagcatgctt
aggcattttgatcatatcactaaggactaccatgaccacattgctgaaatatcagccaag
cttgtagcgataatggatagcttatttgacaagctattatctaagtatgaggtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatcttcttccagaagaacaaacacaaatgttatttttaagaattaatgcaagt
tataaactccacttgaaaaagcagttatctcatttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggtcttaaagatttggacctaaatatgtccgagatctgggaacagaagaggtga
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