Lutra lutra (Eurasian river otter): 125109501
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Entry
125109501 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-6-like
KO
K06761
contactin 3/4/5/6
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125109501
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
llv00537
]
125109501
Cell adhesion molecules [BR:
llv04515
]
Immunoglobulin superfamily
Contactins
125109501
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
llv00537
]
Others
125109501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
C2-set_3
V-set_CD47
Ig_6
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
125109501
NCBI-ProteinID:
XP_047602465
LinkDB
All DBs
Position
1:complement(179500744..179736281)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRLLWKLIILLPLINTCAGAGLLSHPVFTQEPEDVIFPLDLSKSEIILNCAASGYPSPHY
RWKQNGTDIDFTMSYHHRLDGGSLAISSPHTDQDIGIYQCLATNALGTILSRKAKLQFAY
IEDFETKTRSAVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGN
LYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAA
KDSSVKLECFALGNPVPDISWRRLDGNPLPRKVKYSKSQAILEIPNFQQEDEGFYECIAG
NLRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDNLFWECKASGKPNPWYTWLKNGEHLNP
EERIQIENGTLTITMLNVSDSGVYQCAAENKYRIIYANAELRVLASAPDFSKNPIKKNSV
VQVGGDITMECKPNAFPRATISWKRGMESLKQSKRVFLSEDGSLKIYNVTRSDAGSYTCV
ATNQFGVAKNTGSLVVKERTVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCMVKTTLESLSAVADIIVRGPPGP
PEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTVPEILSGKTYNA
TVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVIT
WESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRFVYRNESITPLSPFEVKVGV
YNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDDSKESIIGKIRVNGNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGIPALEPSIYFLSVVIXFFT
VLQFSHLHDE
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactgataattctgctgccactcataaatacttgtgcaggtgct
ggtctcttgagtcatcctgtttttacccaggagccagaagatgttatttttcctttggat
ttatcaaaatctgaaatcatcctgaattgtgctgccagtggttatccttcaccccattat
aggtggaaacaaaatggcacagatattgattttaccatgagttatcaccacaggttggat
ggaggcagtttggcaatcagtagcccccatacagatcaagatattggcatataccagtgc
ctggccaccaacgctctggggacgattctgagtcggaaggcaaagctccaatttgcatat
attgaagactttgaaaccaaaacaagaagtgcagtgtccgtccgagaaggtcaaggtgtg
gtgcttctctgtggcccaccaccacactttggagacttatcttatgcatggaccttcaat
gataaccccttatatgttcaagaggacaacaggcggtttgtatcccaagagacaggaaac
ttatacattgccaaagtggaaccatcagatgtgggcaactacacttgcttcataacaaac
aaagaagcacagagaagtgttcaaggaccgcccactccattagtgcagcgcactgatggt
gtgatgggggaatatgaaccaaagattgaagtgcgttttcctgaaactatacaagctgca
aaggattcatctgtaaaactggaatgctttgcccttggaaatccagttcctgatattagt
tggaggaggttggatggaaacccgttgccaaggaaagtcaagtacagcaaatcccaagct
attcttgaaatcccgaactttcaacaggaagacgaaggcttctatgagtgcattgcaggc
aaccttcgaggaagaaaccttgcaaagggtcagctcattttctatgccccaccagaatgg
gaacaaaaaatccaaaatacatacctgtctatctatgacaatttgttttgggaatgcaaa
gctagtggaaagccaaatccttggtacacctggttaaagaatggtgaacacctcaatcca
gaggaaagaattcaaatagaaaatgggacacttaccataactatgttgaatgtgtcagat
tcgggtgtctaccagtgtgctgcagaaaacaaatatcggataatttatgcaaatgcagaa
ttgagggtattagcctcagctcctgatttctctaaaaatcccattaaaaaaaattcagtt
gttcaagttggtggggatattactatggaatgcaagccaaatgcctttcctagggctact
atctcctggaaaagaggaatggagagcctgaaacaaagcaaaagagtgtttctctcagag
gatggcagcctcaagatatataacgttactaggtcagatgccggatcatatacttgcgta
gctacaaatcagtttggcgttgcaaagaacactggcagcctagtcgtaaaagagaggact
gttattaccattccaccttccaaaatggacgttacagttggtgagagtatagtcctacca
tgccaggtgtcccatgacccatccattgaagttgtatttatatggtctttcaatggagat
gtcatagacttaaaaaaaggagtggctcattttgaaaggattggaggagaatctgttggg
gatttgatgataaggaatattcagttaaatcattcaggaaaatacctatgcatggtaaaa
acaactctagaaagtttatctgctgtagctgatatcattgttagaggtccaccaggtccc
cctgaggatgtaagagtggaacacatttccagtactacttctcaactaagctggagacca
ggctcagataataatagtcccattcaaatatttactgttcaggctcggacaccattttct
gtgggttggcaggctgtttcaactgttccagaaattctcagtggtaagacatacaatgca
acagtggttggtttgagtccttgggtggaatatgaatttcgcgttgttgctgggaatagc
attgggattggagaaccaagtaaagcatcagaactgttaagaaccaaagcatcggtccct
gttgtggcaccaacaaacatcaatggaggtggaggaagtcggtcggaactcgtcattacg
tgggagtcaattccagaagaactacagaatggagaggaatttgggtacatcatcatgttg
cggcccgttggctcaacagcctggaccaaggaaagagtcccatctgtagaatcatcaagg
tttgtttatagaaatgaaagcatcactcccctctctccctttgaagtcaaagtgggtgta
tataataatgaaggagaaggatctctgagtaccgtgtccattgtctactctggggaagat
gaacctcaactggccccaaggggaacttctgtccagagtttttctgcttcggaaatggag
gtgtcatggaatgctattgcctggaatagaaacactggaagagtgttgggctatgaggtg
ttatactggacagatgactccaaagaatccataattgggaaaattagagtcaatgggaat
gtcacaaccaaaaacatcaccgggctaaaagccaataccatctactttgcttctgtgaga
gcttataacactgctggaacagggccctcaagccccccagtcaatgttaccaccaaaaag
tctcctccaagccaaccaccagctaacattgcctggaagttgacaaactctaaattatgc
ctgaattgggagcacgtaaaaaccatggaaaatgagtctgaagtattgggctacaagatt
ctgtaccggcaaaacagacagagtaaaacacatattttggaaacaaacaatacctcggct
gagcttctggttccgtttgaagaagactacttgattgaaataagaacagttagcgatggt
ggggatggaagcagcagtgaggaaattagaattccaaaaatgtcaagtttgagttccaga
ggaattccagccttagaacctagcatctacttcctgtcagttgtcatcnnattttttact
gttttacaattcagccacttacacgatgaatga
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