Lactococcus cremoris subsp. cremoris KW2: kw2_1150
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Entry
kw2_1150 CDS
T02848
Symbol
rumA1
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA1
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
llw
Lactococcus cremoris subsp. cremoris KW2
Brite
KEGG Orthology (KO) [BR:
llw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llw03009
]
kw2_1150 (rumA1)
Enzymes [BR:
llw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
kw2_1150 (rumA1)
Ribosome biogenesis [BR:
llw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
kw2_1150 (rumA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
TRAM
Methyltransf_15
Methyltransf_25
MTS
PrmA
TRM
PCMT
Methyltransf_11
N6_N4_Mtase
DOT1
CMAS
Motif
Other DBs
NCBI-ProteinID:
AGV73108
LinkDB
All DBs
Position
1194912..1196282
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AA seq
456 aa
AA seq
DB search
MDMTNFKKNDIFEAEVLDLTHEGQGVVKVDSYPFFVDNALPGERIKMRVLKVGKSFGFGR
VDEFISQSEHRTTQLNLDYLRTGIADFGHLTYNEQVKFKQKQVVDILRKTAGKEDFPVSP
VIESIKTIKYRNKAQIPVQMVNGILTTGFYRKNSHSLIPVEDFYIQHPEIDAVVLFLRDE
FRKINLQAYDEKTRKGWLRNIVVRRGFHTSEMMVSLVVTSKKLPENVDLVIDKLVEHFTN
IKSVQLNINNGTGSFILGKEFVLLYGKDFITDLMLDKTYQISAPAFYQVNTPQAEKLYET
AFEFAELKPGDIVIDAYSGIGTIGISMADRVAEVYGMEVVPAAVENAKRNAQLNELENTH
YEVGTAEKIMPKWLDEGIKPDVIFVDPPRKGLDETFIKSATATNPRRIVYISCNPATFAR
DVVRFENEGYILDKVQPVDLFPQTHHIELVARFNKK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacatgacaaatttcaagaaaaacgatatatttgaagcagaagtccttgatttgaca
catgaagggcaaggagtggttaaagttgattcttacccattttttgtagacaatgcctta
cctggtgaacggataaaaatgcgcgttcttaaagttggaaaatcatttggttttgggcgt
gtggatgaatttataagccaaagtgagcatcgcacgactcagttaaatcttgattattta
agaactgggattgctgattttggtcatctgacttataatgaacaagtaaaatttaaacaa
aagcaagtcgttgatattttaagaaaaacggctgggaaggaagatttccctgtttctcca
gttattgaatctattaaaacgataaaatatcgaaataaggcacagattcctgttcaaatg
gttaatgggattttaactactggattttatagaaaaaattctcactcattaattccagtc
gaagatttttatattcaacatcctgaaattgatgcagttgtcctttttttgcgtgatgag
tttcggaaaattaatttacaagcttacgatgaaaaaacgcgcaaaggttggctacgaaat
attgtggttagaagaggttttcatacaagtgaaatgatggttagccttgttgtaaccagt
aaaaaactcccagaaaatgttgatttggtaattgacaaattagtggagcattttactaat
attaaatctgttcaactcaatattaataatggaactggctcatttattttaggtaaagag
ttcgttttattgtatggaaaagattttattacagatttgatgttggacaaaacttatcaa
atttctgcaccagctttttatcaagtcaacactccacaagctgaaaaactttatgaaaca
gcatttgaattcgcagaattaaaaccaggagatattgttatcgatgcctattctggtatt
ggaacaatcggaatcagcatggctgatcgagtcgctgaggtttatgggatggaagttgtt
ccggctgctgttgaaaatgcaaaacgtaatgctcaattaaatgaacttgagaacacacat
tatgaagtaggaacagcagaaaaaattatgcccaagtggcttgatgaaggaataaaacct
gatgttatttttgttgacccaccaagaaaagggctcgatgaaacttttattaaatcagca
acagcaactaatcctcggagaatcgtttatatttcatgtaatcctgcaacctttgctcga
gatgttgtacgttttgaaaacgaaggctatattttagataaagttcaaccagttgattta
ttcccacaaacgcatcatattgaacttgttgctcgctttaataaaaaataa
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