Lactococcus cremoris subsp. cremoris KW2: kw2_1193
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Entry
kw2_1193 CDS
T02848
Symbol
topA
Name
(GenBank) DNA topoisomerase I TopA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
llw
Lactococcus cremoris subsp. cremoris KW2
Brite
KEGG Orthology (KO) [BR:
llw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llw03032
]
kw2_1193 (topA)
03400 DNA repair and recombination proteins [BR:
llw03400
]
kw2_1193 (topA)
Enzymes [BR:
llw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
kw2_1193 (topA)
DNA replication proteins [BR:
llw03032
]
Prokaryotic type
DNA Topoisomerases
kw2_1193 (topA)
DNA repair and recombination proteins [BR:
llw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
kw2_1193 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
AGV73151
LinkDB
All DBs
Position
1242359..1244479
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AA seq
706 aa
AA seq
DB search
MPTSTKTSTKKKTTRKKVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKKST
MSVDIENDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHILNLP
LEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKKVKKG
LSAGRVQSIALKLIVDRENEINAFIPEEYWSIDGEFKKGTKKFKASFWGIDGKKHPLKNN
EDVIKVMERLDGPDFNVDKVEKKERRRNSPLPYTTSSMQQDAANKLNFRTRKTMMVAQQL
YEGLTLGSQGHQGLITYMRTDSTRISPVAQSAAHSYIAEQFGEKYSKHGSKVKNASGAQD
AHEAIRPSDVFNTPESIAKYLDKDQLKLYTLIWNRFVASQMVAAIFDTVKVNLSQNGVIF
IANGSQVKFDGYLRIYNDSDKSNMLPEMEENETVKKANVKPEQHFTQPPARYSEATLIKT
LEENGVGRPSTYAPTLETIQKRYYVRLSAKRFEPTELGEIVNKLIVEFFPNIVNTEFTAE
MEKDLDQVEEGKRQWIEVVDQFYKPFAKELENAEEGMEKIQIKDEPAGFDCDVCGSPMVI
KLGRFGKFYACSNFPDCRNTKAIVKEIGVKCPLCHEGNIIERKTKKNRIFYGCDRYPECE
FTSWDKPIGRDCPKSGHFLVEKKVRGGGKQVVCSNDECDYQEEKQK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcaactaaaactagtacaaagaaaaaaacaacacgaaagaaagtgactcct
gggaaaaatctcgtaattgtcgaatcccctgctaaggccaaaacaattgaaaaatatctt
ggacgaaactataaagttgttgcttctgtcggtcatattcgtgatttaaaaaaatcaacg
atgtctgttgatatcgagaatgattatgaaccacaatatatcaatattcgaggtaaggca
cctctaatcaactcactcaaaaaagaagccaaagctgccaaagctgtctatctcgcgagt
gacccggaccgtgaaggagaagcaatttcatggcacttagctcatatcttgaatcttcca
ctcgaagaaaaaaaccgtgtggtcttcaacgaaattactaaagacgccgtgaaaaacgcc
tttaaggaaccacgtcaaattgatgtagatttggttgatgcccaacaagcacgtcgcgtt
cttgaccgcctagttggatattcaatcagtccaattctttggaaaaaggtcaaaaaagga
ctttctgcgggtcgagttcaatcgattgctttaaaattaatcgttgaccgtgaaaatgaa
attaatgcctttatcccagaagaatactggtcaattgatggggaattcaaaaaaggaacc
aagaaatttaaagcttcattttggggaattgatggaaaaaaacatccattaaaaaataat
gaagatgttattaaagtgatggagcgtttagacggtcctgatttcaatgtcgataaagtt
gaaaagaaagaacgtcgcagaaattcaccactcccttatacaacaagttcaatgcagcaa
gatgcggcaaataagcttaactttcgtacccgtaaaacaatgatggttgcccaacagctt
tatgaaggactgacactcggaagtcaaggacatcaaggtctgattacctatatgcgtacc
gactcaacacgtatttcgccagtcgcacaaagtgcagctcatagctatattgcggaacaa
tttggcgaaaagtacagcaagcacggttcaaaagttaagaatgcctctggtgctcaagac
gcccacgaagccattcgaccttcagatgtctttaatacacctgagtccattgctaaatat
ttggacaaagaccaattaaaactctatacacttatttggaatcgttttgttgctagccaa
atggttgcagccatttttgatactgtgaaagtgaacctttcacaaaatggtgtcattttt
atcgccaatggttcacaggtcaaattcgatggttatcttagaatctacaacgactccgat
aaatcaaatatgcttccagaaatggaagaaaacgagacagtgaaaaaagcaaatgttaaa
ccagaacaacacttcacacaaccaccggctcgatattctgaagcaacactcattaaaaca
ttagaagaaaacggtgtaggccgtccctcaacctatgctccaaccttagaaacaattcaa
aaacgctattatgtaagattatcagcaaaacgatttgaacctacggaacttggagaaatc
gttaacaagttgattgttgaatttttccctaacattgttaataccgaattcactgccgaa
atggaaaaagatcttgatcaggttgaagaaggaaaacgccaatggattgaggttgttgac
caattctacaaaccttttgctaaagaacttgaaaatgctgaagaaggtatggagaagatt
caaatcaaggatgaacccgctggttttgattgtgatgtgtgtggaagtccaatggtcatt
aaattaggacgttttggtaagttttatgcttgtagtaacttcccagattgccgaaatacc
aaggctatcgtgaaagaaattggcgtaaaatgtccactttgtcatgaaggaaatatcatt
gaacgtaaaactaagaaaaatagaattttctatggttgtgaccgctatcctgaatgtgaa
tttacaagctgggacaaaccaattggacgtgattgtcctaaatctggtcattttctcgtt
gaaaagaaagttcgtggtggtggtaaacaagtcgtgtgttcaaatgacgagtgtgactat
caagaagaaaaacaaaaataa
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