Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0003
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Entry
NCDO2118_0003 CDS
T03437
Symbol
rexB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_0003 (rexB)
Enzymes [BR:
llx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCDO2118_0003 (rexB)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCDO2118_0003 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Dna2
Motif
Other DBs
NCBI-ProteinID:
AII11505
UniProt:
A0ABC8A2G7
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All DBs
Position
3347..6646
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AA seq
1099 aa
AA seq
DB search
MEILYTEITQDLTEGLLEISLEELEKNRKVYYIVPSSMSFEKEKEILERLAKGSDAAVFD
LLVTRFKQLPYYFDKREKATTKTELGTAGLSMLFRRVLRSFSKEEIPLYFSLQDSAGFLE
MLIQLRTELLTANLSVENLPDSPKNQELKKILSRFEEKLANDYANYSEFGDFTSRLADGE
FDFQLKDVTIVIDGYTRFSAEEELFIESIQDRVARFVIGTYSDENSLTAGSETIYISTSQ
MIGRFRSKFPVELRKMAFSSVNEVYNKLTKLLDLDSRFAISDQNIEINSADAKYFRIWEA
ENQKVEIEGVAKEIRQKISQGAFFKDFTVLVGDPAAYEITLKEIFELYEIPFFYAQEESM
SQHPLVIFFESLLSIKKNNYRTDDVVNLLKSKVYTDVNLDEEVIDYFEYYVQKYKISGRK
KFTEAFNESEFSKIELVNQLRENLLGNDSPLQAFLGTNRQKTGKKWVSDLQVLLENGNVM
ANMNTYFSEAESENKHQMADKHEQVWQMLISILNEFLAVFSDEKLKSVEFLDILLAGLKN
AKYRQIPANVDVVNIKDYELVEPKTNKYIYAIGLSQTNFPRIKKNSTLLSDEERLEINQT
TDENQFIEQLNVVNYQKNQFTVLSLVNSAKETLVLSMPQIMANEQGEFSPVFQLFLNHSD
EKILQKIQEVNLFESLEHIGNSRSVISMIGKIERELVETEEKNDDKRVFWSSIFRILVKS
NPDFQKILLDLAKDIDTVNLSKETLDKIYGDKLYASVSSFERFYNCEYQYFLETTLGLET
FENIDINSKIVGNFFHEVFEKVMQEEALSAENFDEKLTKVLHDVDSNYSRYFTQDATARF
TWTNLEEIVRQTATVLKETVSTDELKTLLTESSFGLPKSELGNFSVDDIYLRGRIDRLDQ
LSSDYLGAIDYKSSAHSFKLQDAYDGLSLQFMTYLDVIKEAFPNQKIWGALYLQFKNQPI
NLSEINHLSEIAGLLKESMRYDGLVLEEAADQIKAIENITVKKSNIYNQEEFEQLLKLNE
NHYQHAGQRLKSGQIAINPIMKRSEGIDQTGNVRGCRYCPLKSICRFEANVHMNEHSREI
GQKSQAEILAELKGEGRNE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttatatactgaaattacacaagatttaacagagggactattagagatttct
cttgaagaacttgaaaaaaatcgaaaagtttattacattgtgccttcttcaatgtcattt
gagaaggagaaagaaattttagagcgcttggctaagggaagtgatgcagcagtttttgac
ttactcgtcactcgttttaagcaattgccttattattttgataagcgggaaaaagcgaca
acaaagacagagttaggcacagcaggcctttcaatgctttttcgacgtgttttgaggagt
ttttcaaaagaagaaattccgctgtatttttctctacaggattctgctggttttttggaa
atgctaattcagttaagaacagagttactgacagcaaatctgtcagtagaaaatttacct
gacagccctaaaaatcaagaattaaaaaagattttaagtagatttgaagaaaagttagca
aatgactatgctaactactcagaatttggtgattttactagtcgtcttgctgatggggaa
tttgattttcaactcaaagatgtgacaattgtcattgatggatatactcgattttctgcg
gaagaagagctttttattgaaagtattcaagatagagtggcacgttttgtcattggaact
tatagtgatgaaaattcactgacagccggatctgaaacaatttatatcagtacgagtcaa
atgattgggcgttttcgcagtaaatttccagtagaactaagaaaaatggctttttcatcc
gtcaatgaagtttacaataagttgacaaaattactcgatttagattcaagatttgccatt
tctgatcaaaatattgaaataaattctgctgatgcaaaatatttcagaatttgggaagcc
gaaaaccaaaaagttgaaattgaaggtgtcgcaaaggaaattagacaaaaaataagtcag
ggggcttttttcaaagattttacagttttagtaggtgacccagctgcttatgaaattact
ttgaaagaaatttttgaactttatgaaattccgtttttctatgcccaagaagaatcaatg
agtcagcatcctttggttatcttttttgaaagtttactttcaattaaaaagaataattat
cggacagatgatgttgtcaatcttctaaaaagcaaggtttacactgatgtcaaccttgat
gaagaagtcattgattactttgaatactatgttcaaaaatataagatttctggtcgaaaa
aaatttacggaagcattcaatgaaagtgagttttctaaaattgaattagtgaatcaactt
cgcgaaaacttattgggaaatgattctcctttacaagcctttttggggacaaatcggcaa
aaaacaggaaaaaaatgggtttctgatttacaagttctacttgaaaatggaaatgtaatg
gccaatatgaacacttatttttcagaagcagaatctgaaaataagcatcaaatggctgat
aaacatgaacaagtttggcaaatgcttatttcgatattgaatgagtttttggccgttttt
tctgatgaaaaattgaaaagtgtggagtttttagatattttattagcaggattgaaaaat
gcgaaatatcgacaaattccagcaaacgttgatgttgtaaacatcaaagattatgaactt
gttgaacctaaaactaataaatatatctatgccattggtttgagtcaaaccaattttcca
agaataaagaaaaattcaacacttttatccgatgaagaacgactagaaatcaatcaaaca
actgatgaaaatcagtttattgaacagttgaatgttgtcaactatcaaaaaaatcagttt
acagtcctttctttagtgaattcagcaaaagaaactttagttttgtccatgccacaaatt
atggcaaatgagcaaggagaattttcaccagttttccaattatttttgaatcattcggat
gaaaaaattcttcaaaaaattcaagaagtcaatctttttgaaagcttagagcacattgga
aacagtcgttcagtgatttctatgattggaaaaattgagcgtgaacttgttgaaactgaa
gaaaaaaatgatgacaaaagagttttttggtctagtattttccgaatcttagttaagtca
aatcctgattttcaaaaaatattattggatttagctaaagatattgatacggtcaactta
tcaaaagaaaccttagacaaaatttatggtgataaactttatgcttctgtcagttctttt
gaacgcttttataactgtgaatatcagtactttttagagaccactttgggtctggaaact
tttgaaaatattgatataaattccaaaattgtcggtaactttttccatgaagtttttgaa
aaagtcatgcaagaagaagctttgtcagctgaaaattttgatgaaaaattgacaaaagtt
ttacatgatgttgacagtaattactctcgttattttactcaggatgcaacagcaagattt
acttggaccaatttagaagaaattgttagacagactgcaacagttttaaaggaaacagtt
tctactgatgaacttaaaactttactgacagaaagtagttttggcttaccaaaaagtgaa
ttaggtaatttttctgttgacgatatttacttacgaggaagaattgaccgtttggaccaa
ctttcttctgattatttaggagctatagattacaaatcaagtgctcattcctttaaatta
caggatgcttatgacggtctgagtttacaatttatgacctatttagacgtgattaaagaa
gcttttcctaatcaaaaaatatggggtgctctttatttacaatttaaaaatcaaccaatt
aacttatcagaaatcaatcatttatcagagattgctggcttattgaaagaatcaatgcgc
tatgatggtttagttttggaagaggcagctgaccaaattaaagcaatagaaaatattact
gtaaaaaaatctaatatttacaatcaagaagaatttgaacagcttttaaaattgaatgaa
aatcattatcagcatgctggtcagcgacttaagagtggtcagattgcaataaatccaatt
atgaaacgctccgaagggattgatcaaacaggtaatgttcgaggttgtcgctactgtccg
cttaaatctatttgtcgatttgaagcaaatgtacacatgaatgagcatagtcgtgaaatt
ggtcaaaaatcccaagcagaaatcttagcagaattaaaaggagaagggcgaaatgagtga
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