Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0817
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Entry
NCDO2118_0817 CDS
T03437
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCDO2118_0817 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llx03019
]
NCDO2118_0817 (rnc)
03009 Ribosome biogenesis [BR:
llx03009
]
NCDO2118_0817 (rnc)
03036 Chromosome and associated proteins [BR:
llx03036
]
NCDO2118_0817 (rnc)
Enzymes [BR:
llx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NCDO2118_0817 (rnc)
Messenger RNA biogenesis [BR:
llx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCDO2118_0817 (rnc)
Ribosome biogenesis [BR:
llx03009
]
Eukaryotic type
90S particles
RNase
NCDO2118_0817 (rnc)
Prokaryotic type
rRNA processing factors
NCDO2118_0817 (rnc)
Chromosome and associated proteins [BR:
llx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NCDO2118_0817 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AII12306
UniProt:
A0ABC8A503
LinkDB
All DBs
Position
841577..842272
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AA seq
231 aa
AA seq
DB search
MLKLQKKLKNDYGLVFNDEDLLKTAFTHSSFTNEERLPKIANNERLEFLGDVALSLVISD
YLYRTYPEKLEGELSKMRSSIVRTESLANFSRSCGFGEFLRLGHGEEKMGGRDRETTLEN
LFEAFLGALFIDQGMDEVRKFIQHVVIPHVKNDDYVKVIDYKTELQEVLQIGGETTISYK
ILKEEGPAHDRSFVAAVFNNGKELGRGLGKSKKVAEQKAAENAIKGQNHVS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcttcaaaaaaaattaaaaaatgattacggattagtcttcaatgatgaagat
ttattaaaaacagcttttacacactcttcatttacaaatgaagaacggctcccaaagatt
gcaaacaatgaacgtttggaatttttgggagacgttgccctatctttggttatttctgat
tatctttatcggacatatcctgagaaattagagggagaactttccaaaatgcgctcgagc
attgttcggacagaatcacttgctaatttttcacgctcatgcggttttggtgagttcttg
cgattaggtcatggtgaagaaaaaatgggcggtcgtgaccgcgaaacaacactagagaac
ctttttgaggcttttttaggtgcgctttttattgaccaaggaatggatgaagttcgtaaa
tttatccaacatgtagtcattcctcacgttaaaaatgatgactatgttaaagtgattgac
tataaaacagaacttcaagaagtgttacaaattggtggagaaacaacgattagctacaag
attctgaaagaagaagggccagctcatgaccgttcctttgtggccgcggtttttaacaat
ggtaaagaactcggacgagggcttggaaaatctaaaaaagttgcagaacaaaaagcagca
gaaaatgcaataaaagggcaaaaccatgtatcttaa
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