Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0818
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Entry
NCDO2118_0818 CDS
T03437
Symbol
smc
Name
(GenBank) Chromosome partition protein
KO
K03529
chromosome segregation protein
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llx03036
]
NCDO2118_0818 (smc)
Chromosome and associated proteins [BR:
llx03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NCDO2118_0818 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Tropomyosin
SPAM
ABC_tran
SbcC_Walker_B
bact_SelB_WH_2nd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AII12307
LinkDB
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Position
842262..845786
Genome browser
AA seq
1174 aa
AA seq
DB search
MYLKKMEIVGFKSFADKTKVEFDKGITAVVGPNGSGKSNIVEALRWVLGEQSAKALRGGK
MPDVIFAGTEKRRALNYAEVIAHFDNSDHYLQGQDENEEVVITRRLYRNGDSEFLMNGRK
CRLRDIHDLFTDTGLGRDSLSIISQGRIESVFNSKPEERRAIFEEAAGVLKYKNRRNETE
SKLNSTQDNLDRLEDIIFELNSQLVPLQSQRDTALRFQELEAERSDLSLSVLVGQLESKK
AKYDQTELDLAQVAQELASLSTRKKVYDEQVSQLRTERQKVEAEQEKLQADQLNFSNLKS
DLTRKIELFDVQKDSSEKSAAEREERLENLKSRLEITQQNLTEVQKKSELLLTEKNDLDK
LLTELSAVLATLSESPEVVMERLRDEFVQLVEEEAQISNEIVRNKAEITDLSRRQSEQDE
SVRENLTKFEKISQDLSEAQENLNTVKKEIETLLAKFEEENQAEKKQAELERLAQNKMYD
YLQELNQHKARLTSLQNIRESHSNLFAGVRAVMQNAAQIGGVIGVVSDLLTFDSKYTTAI
DIALGGGSQNVVTEDENAAKRAIAFLREKRLGRATFLPLTTIKGRDFNGLNRIQNMTGFV
DLAINLVSFESRLHKAMSSLLGTTVIVDSGENATAIARAMNYNVRIVTLDGTQINPGGSY
AGGAGKRNSTTFTSVEISNLEKQIKLSEEQLKISEKEVQKAQSARQELLKEIELLKTQGE
EKRFVEQSLNLKIEQLTEQKVALEQLTNLSANQEATGNLLELTKENEHKVEVLAKITERK
AEIEKQLEEVKTNSQAHKALQSEKTSALNQAQLRQSEVASELKFTKADEKRLLTDLSALT
EEKNQLTALLNPVQFDETERNNFSKQLTEVEERLSQINVRMVSLKFEREDLAAQMEDLEH
HNQDFIQQTQELNTKKTRYEMQLEQIEGQLMTLQETLNSEHQISFEEAQATAKIVDDLAE
AEQKLKNLERQIKALGPINLDAIAQFDEVNERFTFLSSQKDDLLEAKNLLLSTIDDMNDE
VKIRFKTSFDAIRESFKTTFAQMFVGGLADLELTSDNLLEAGVEIKVQPPGKKLSSLNLM
SGGEKALTALALIFAILRVRTVPFVVLDEVEAALDEANVKRFGDYMNHFDNSNQFIVVTH
RRGTMAAAGSMYGVTMADAGVSKMISVKLDSAIN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaaaaaaatggaaattgtcggcttcaaatcttttgccgataagactaaagtt
gaatttgataaagggataaccgcagttgtcggtccaaatggttctgggaaatcaaatatt
gttgaagcattgcgctgggttttgggcgagcaatcggctaaagcacttcgtggtgggaaa
atgcccgatgttatttttgctggaactgaaaaaagacgtgctcttaattatgctgaggtt
attgctcattttgacaactctgatcattacctgcaaggacaagatgagaatgaagaagtt
gttattacccgacgtttatatcgaaatggcgattccgaatttttgatgaatggtcgtaaa
tgtcgtttacgtgatattcatgatttatttacagatactgggcttggtcgtgactcttta
tcgattatttcccaaggacgaattgaatctgtttttaattctaaaccggaagaaagacgt
gccatttttgaagaagcggcaggtgttttaaaatacaaaaatcgacgaaatgaaactgaa
tcaaaattaaattcaacccaagataatcttgaccgtttagaagatatcatttttgaatta
aatagtcagctcgtgcccttacaatcgcaaagagatactgcactccgttttcaagaacta
gaagcagaacgttcagacttgtcactttctgtactggttggtcagttggaatctaaaaaa
gccaaatatgatcaaacagaacttgatttggcgcaagtggcacaggaattagcgagttta
tcaactcgtaaaaaagtttacgatgagcaagtcagtcaattacgtacagaacgccaaaaa
gtagaagccgagcaagaaaaattgcaagctgaccaacttaatttttctaatctaaaatca
gatttaacaagaaaaatcgaattatttgatgttcaaaaagattcatcagaaaaatcagct
gcggaacgcgaagaacgtttagaaaacttaaaaagtcgtttagaaatcactcaacaaaat
ttgacagaagttcaaaaaaaatcagaacttttactgacagaaaaaaatgacttagataaa
ttactgacagagctgtcagcagttttagcgaccttatctgaatcaccagaagtggtcatg
gaacggttacgtgatgaatttgttcaattagttgaagaagaagcccaaatctcaaatgaa
atcgttagaaataaagctgaaattacagatttgagccgtagacaatctgaacaggatgag
tctgtcagagaaaatttgactaaatttgaaaaaatcagtcaagatttatctgaagctcag
gaaaatttaaatactgttaaaaaagaaatcgagacccttttagcgaaatttgaagaagaa
aatcaagcagagaaaaaacaggcagaattagaacgtttagcccaaaataaaatgtatgat
tatctgcaagaacttaaccaacataaggcccgtttgacttccttgcaaaacatccgtgag
agtcatagtaatttatttgctggtgtccgtgccgtgatgcaaaatgctgcacaaattggt
ggcgtgattggggttgtttctgatttattgaccttcgattctaaatatacaacagccatt
gatattgctctaggtggcgggagccaaaatgtagtcacagaagacgaaaatgcggctaaa
agagcaattgcttttctacgtgaaaaaagattaggacgggcgacttttctaccgttgaca
acgattaaaggacgagactttaatggtttaaatcgtattcaaaatatgacaggatttgtt
gatttagcaatcaatcttgtaagctttgaaagtcggttgcataaggcgatgagctcactt
ttaggaacaacggtgattgttgattctggagaaaatgcaactgctatcgctcgagcaatg
aattataatgttcggattgttacgcttgacggaacacagattaaccctgggggttcttat
gcagggggagctgggaaacgtaattcaacaacttttacttctgttgaaataagtaattta
gaaaaacaaattaagttatcagaagagcagttaaaaatttcagaaaaagaagttcaaaaa
gcccaaagtgctcgtcaagaattgctaaaagaaattgaacttttgaaaactcaaggggaa
gaaaaacgttttgttgaacaatctttgaatttgaaaattgaacaattaacagaacaaaaa
gttgcgctagaacaattaactaatctgtcagcaaatcaagaagcaacaggtaatttgctt
gaattaactaaagaaaatgaacataaagtagaagttcttgcaaaaattacagagcgaaaa
gctgaaattgaaaagcaacttgaagaagttaaaacgaatagtcaagcgcataaagccttg
caatcagagaaaacaagtgctttaaatcaggctcaacttcgtcaatcagaagtggccagt
gaattgaaattcaccaaagcagatgaaaaacgtttactgacagacttgtcagccttgaca
gaagaaaaaaatcaactgacagcacttttaaaccctgtccaatttgatgaaacagaaaga
aataatttctcaaaacaactgacagaagtagaagaacgcttgagtcaaattaatgtccga
atggttagtttaaaatttgaacgtgaagatttagcagctcaaatggaagatttagaacat
cacaatcaagattttatccagcaaacacaagaacttaacacgaaaaaaacgcgttatgaa
atgcaattggaacaaatcgaaggacaattgatgacacttcaagaaacgttgaatagtgaa
catcaaatcagttttgaagaggcgcaagccactgcaaaaatagtggatgatttagcggag
gctgagcaaaaactcaaaaatctagaacgtcaaatcaaggcattaggaccaattaacttg
gatgccattgctcaatttgatgaagtcaatgaacgctttactttcctttcaagtcaaaaa
gatgatttattagaagctaaaaatcttttattgagtacaatcgatgacatgaatgatgaa
gttaaaattcggtttaaaacaagttttgatgcgattcgtgaaagtttcaaaacgaccttt
gctcaaatgtttgttggtgggcttgctgatttagaattaacaagcgacaaccttttagaa
gctggggttgaaattaaagtacaaccgccaggtaaaaaattatcaagtttaaatttgatg
agtggtggagaaaaagcgctgacagctttagctttaatttttgcaatcttaagagtacga
acagtacctttcgtggttcttgatgaggttgaagcggcacttgatgaagccaatgttaaa
cgttttggtgattacatgaatcactttgataatagtaatcaatttattgttgtaacacac
cgtcgtggaactatggcggcagcaggttcaatgtatggcgttacaatggctgatgctggg
gtttctaagatgatttcggtgaaacttgattcggctattaattga
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