Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0894
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Entry
NCDO2118_0894 CDS
T03437
Symbol
hslB
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llx03032
]
NCDO2118_0894 (hslB)
03036 Chromosome and associated proteins [BR:
llx03036
]
NCDO2118_0894 (hslB)
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_0894 (hslB)
DNA replication proteins [BR:
llx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCDO2118_0894 (hslB)
Chromosome and associated proteins [BR:
llx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCDO2118_0894 (hslB)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCDO2118_0894 (hslB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AII12382
LinkDB
All DBs
Position
928454..928780
Genome browser
AA seq
108 aa
AA seq
DB search
MASKQELIDYVADRTELSKLNAAKAITYYISEGTPVHISNFGTFEVRKRAARVSHDVHSR
EKILVGEQNIPVFRAGKALKLATKQELSDEDMVIETLSNMILEVQHHD
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaacaggagttaattgattatgtagcagatcgtacagaactttcaaaactg
aatgcagcaaaggcaatcacttactatatttctgaagggactcccgtgcatatttcaaat
tttggaacttttgaagttcgtaaacgtgcagccagagtcagtcatgatgttcattcaaga
gaaaaaattttagtaggcgaacaaaatattccggtatttagagctggaaaagctttaaaa
ttggctacgaaacaagaactatctgatgaagatatggtgattgaaacattgagcaatatg
attttggaagttcagcatcatgattaa
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