Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_0925
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Entry
NCDO2118_0925 CDS
T03437
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llx03032
]
NCDO2118_0925 (gyrB)
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_0925 (gyrB)
Enzymes [BR:
llx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCDO2118_0925 (gyrB)
DNA replication proteins [BR:
llx03032
]
Prokaryotic type
DNA Topoisomerases
NCDO2118_0925 (gyrB)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCDO2118_0925 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AII12413
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All DBs
Position
963823..965778
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AA seq
651 aa
AA seq
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MNEENKNLEMLADEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA
LAGFASHIEVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKV
SGGLHGVGSSVVNALSTVLDVTVHKDGQKYYQEYHRGLVGDDLKIIGETDRRGTTVHFVP
DPEIFTETVEFDFDKLATRVRELAFLNRGLRISLTDKREGNEKNEVHFHYEGGIQSYVEY
LNENKTVIFEPAIFTEGEMDGIAVEVAMQYTDTYHSVVMSFANNINTHEGGTHEQGFRTA
LTRVINNYAKQNKILKENEDNLTGDDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVTGI
VNKLFAEALTTFMLENPQVARKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLA
DCSSNNPEQTELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKATMDKILANEEIR
SLFTAMGTGFGADYDLSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPVVEAGYVYI
AQPPIYGIKVGSETKEYIQPGENQEKDLQEALARWAQGRTKPTVQRYKGLGEMDDHQLWE
TTMDPEHRLMARVSVEDAAEADKIFDMLMGDRVEPRREFIENNAQYSTIDA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaagaaaataaaaatttagaaatgcttgcagacgaatatgacgccagtcaaatt
caagtacttgaaggtctcgaagctgtacgtatgcgtccagggatgtatattggttcaacc
tcaaaagaaggtttgcaccatttagtctgggaaattgttgacaattcaattgatgaagca
cttgcaggatttgcaagccatattgaggtttttattgagcctgataattcaattactgtt
gttgatgatggacgtggaattccggttgatattcaagaaaaaacgggtcgcccagccgtg
gaaacagtctttacagtgttgcatgctggaggtaaatttggcggaggcggctataaagtt
tctggtggattgcacggtgttggttcatctgttgttaatgctttatcaacagtactagat
gttactgttcataaagatggccaaaaatattatcaagaatatcatcgtggtctcgttgga
gatgatttaaaaattattggtgaaactgaccgtagagggacaactgttcactttgtacca
gacccagaaatttttacagaaactgttgaatttgattttgataagcttgcaacacgtgtt
cgtgagttagcctttttgaatcgcggtcttcgtatttccttaacagataaacgtgaagga
aatgaaaaaaatgaagttcatttccattatgaaggtgggattcagtcttatgttgaatat
ttaaatgaaaataagacagtcatttttgaaccagcaatttttactgaaggtgaaatggat
ggaattgctgttgaagtagcaatgcaatatactgatacttatcattcagtagtgatgtcc
tttgctaacaacatcaacactcacgaaggtggaacacatgagcaaggttttagaacagcc
cttactcgtgttattaataattacgcaaaacaaaataaaattcttaaagaaaacgaagat
aatttaactggggatgatgtccgcgagggattgacagcagttatttcggttaagcatcct
aatccacaatttgaagggcaaaccaaaacaaaacttgggaactcagaagtaacaggaatt
gttaacaaactctttgcggaagctttgacaacatttatgttagaaaatccacaagttgct
cgtaaaatcgttgaaaaagggattttggcaagtaaagcaaggattgcagcaaaacgtgcg
cgtgaagtgacacgtaaaaaatcagggcttgaaatttccaaccttcccggtaaattagct
gactgttcatcaaataatccagaacaaacagaattattcatcgtcgaaggagattcggct
ggaggttcggctaaatcaggacgtaatcgtgaatttcaagcaattttacctattcgtggt
aagattttgaatgtggaaaaagcaacgatggataaaattttggccaatgaagaaattcgt
tctctattcactgcaatgggaactggttttggagcagattatgatttgtcgaaagcacgt
tatcataaacttgttatcatgaccgatgccgatgtcgatggagcacacatccgtacgctt
ttactaacactcttctaccgttatatgcgcccagttgttgaagcaggatatgtttatatt
gctcagccaccaatttacggtatcaaagttggttcagaaacaaaagaatacattcaacca
ggtgaaaatcaagaaaaagatttacaagaagctttagcacgttgggcacagggaagaaca
aagcctactgtacaacgttataaaggtttaggggaaatggatgaccatcaactttgggag
acaacaatggatcctgaacaccgtttaatggcacgtgtatctgttgaagacgcagcagaa
gctgacaaaatctttgatatgctcatgggagacagagttgaacctcgtcgtgaatttatc
gaaaataatgctcagtactcgacaattgatgcataa
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