Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1046
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Entry
NCDO2118_1046 CDS
T03437
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03030
DNA replication
llx03430
Mismatch repair
llx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCDO2118_1046 (dnaQ)
03430 Mismatch repair
NCDO2118_1046 (dnaQ)
03440 Homologous recombination
NCDO2118_1046 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llx03032
]
NCDO2118_1046 (dnaQ)
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_1046 (dnaQ)
Enzymes [BR:
llx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCDO2118_1046 (dnaQ)
DNA replication proteins [BR:
llx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCDO2118_1046 (dnaQ)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCDO2118_1046 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
PAS
CAF1
Motif
Other DBs
NCBI-ProteinID:
AII12531
LinkDB
All DBs
Position
1089885..1090718
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AA seq
277 aa
AA seq
DB search
MSEKYVVFDFETTGFSAQKNEIIQIGAVKYDENNQEQARFNQLVKNQRSYVSTEITQLTG
IKPADLLNQPTIEEILPEFLDFIKGHLLVAHNAPFDISFLYQAIIDCAITDVEAFRVYDT
LAESKKLLTMSSYALENFKDLLEMNDLRSHDALNDCLITAKLYQYLQKIEEVELSVESEV
TDELGQLDLFGDSSDEITDSLRRKLNLPITKALVYYQQNLERKWERFEVLGISIEREYSV
GSSLNIRLHNSEKVKIHSDFLKEMRKANFVTIMEEEK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaatatgtcgtatttgactttgaaactacaggattttctgcacaaaaaaat
gaaattattcaaattggagcggtaaaatatgatgagaataatcaagagcaagctagattt
aatcagttagtaaaaaatcaacgctcttatgtctcaactgaaatcactcaattgactggc
ataaaaccagctgatttgttaaatcaaccaacgattgaagaaattttacctgaattttta
gacttcatcaaaggtcatttattagtggctcataatgctccttttgatatttcttttctt
tatcaggccattattgattgtgcaattactgatgttgaggcttttcgtgtctatgatact
ttggcagaaagtaaaaagttattaactatgtcttcttatgctctagaaaattttaaagac
ctactagaaatgaatgatttacgttcgcatgatgcgctcaacgactgcttaatcacggca
aaactttatcaatatttacagaaaattgaagaagttgagctgtcagtagaatcagaagtt
actgacgaactcggtcagttagatttatttggtgacagctctgatgaaattactgacagc
cttcgcagaaagttaaatttaccaatcaccaaagctttagtctattatcagcaaaatctt
gagcgaaaatgggaacgatttgaagttcttggaatttcgattgaacgagagtactccgta
ggttcgagtttaaatattcgtttacataattcagagaaagtgaaaattcattctgatttt
ctaaaagaaatgcgaaaagccaatttcgtgacgattatggaggaagaaaaatga
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