Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1121
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Entry
NCDO2118_1121 CDS
T03437
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03420
Nucleotide excision repair
llx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCDO2118_1121 (pcrA)
03430 Mismatch repair
NCDO2118_1121 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_1121 (pcrA)
Enzymes [BR:
llx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCDO2118_1121 (pcrA)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCDO2118_1121 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCDO2118_1121 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
CdiI_ImmP
Motif
Other DBs
NCBI-ProteinID:
AII12606
UniProt:
A0ABC8A5S1
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All DBs
Position
1168139..1170415
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AA seq
758 aa
AA seq
DB search
MNPLLQGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAKEMRERALSLTPRAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGDQKSLM
KRILKEANLDPKKWEPKGLLNAISNAKNDLLDESAYEAQTSARHPYEMVVARVYKIYQKE
LRKAESMDFDDLIMQTLRLFDENPDVLSYYQGKFQYIHVDEYQDTNHAQYQLVKLLASRF
QNICVVGDADQSIYGWRGADMQNILDFEKDYPKTKVVLLEENYRSTKTILDAANNVIKNN
LKRRPKELWTQNDAGDKIVYFRAGNEQEEANKVSEIITSGIRSGRSYADYAVLYRTNAQS
RTIEDSFVKSNIPYTMVAGTKFYSRKEIRDVIAYLNVVANPADNMSFERIVNEPKRGVGP
GALEKLRRFADSRGLSLADSSFDIMLSDIRGKAAGEIYNLAMAFDLLRTHSESSTITELV
EEMLERTGYVKALQMMPSIENQARIENIEEFLSVTKGFDEKSEIPLDEETGEPIVETGLD
KLSRFLNEVSLLSETDAYEEESDQVTMMTLHAAKGLEFPIVFLIGMEENIFPLSRVNEDI
DELEEERRLAYVGITRAEETLYLMNANQRVLYGKTNYNRPSRFISEIDDELLEYAGIARK
ANSSFNASYKSGGFASGISMSDALHQRKAVINPTAAQATINNSETEDWQIGDTAIHRKWG
EGMVLGISGSGKNMELKINFPEVGMKRLLAAMAPIEKK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactattacaaggaatgaacgaaaaacaagcagaagcggtccaaactacagaa
gggcctttattgattatggcaggagctggttcgggtaagactcgtgtcttaactcatcga
attgcttacttaattgatgaaaaaatggttaatccttggaatattttagcgattaccttt
acaaataaagcagcaaaagaaatgcgggagcgtgctttatcacttactccaagagcacaa
gatacattaattgcgacctttcactcaatgtgtgtaagaattttgagacgtgatgccgac
catattggttataatcgtaattttacaattatagatccaggggaccaaaaatcgttgatg
aaacgaattttgaaagaagctaatttagatcctaaaaaatgggaacccaaaggtctttta
aatgcgatttcaaatgctaaaaatgatttattagatgaatcagcttatgaagctcaaaca
agcgctagacatccatatgaaatggttgttgcgcgtgtttataagatttaccaaaaagaa
ttacgaaaagcagaatcaatggattttgacgatttaatcatgcagacgttgcgccttttt
gatgaaaacccggatgtcctttcttactatcaaggaaaatttcaatatattcatgttgat
gagtatcaagataccaaccatgcacaatatcagttggttaaacttttagccagtcgtttt
caaaatatctgtgtcgttggggatgctgaccaatcaatctatggttggcgcggagcagat
atgcaaaatatcttagactttgaaaaagattatccaaaaactaaagttgttttgcttgaa
gaaaattaccgctcaacaaaaacaattcttgatgcggcaaacaatgttataaaaaataat
ttaaaacgtcgaccaaaagaactctggacgcaaaatgatgctggagataagattgtttat
ttccgcgctggaaatgaacaagaagaagcaaataaggtttctgaaattatcacatcaggc
attcgttcaggacgttcttatgctgactatgctgtgctttatcggactaatgctcagtct
cggacaattgaagattcttttgttaaatctaatattccctatacaatggttgcgggaact
aaattctactcacgtaaggaaattcgtgatgttattgcttacttaaatgtagtagcaaat
ccagcggataacatgagttttgaacgaattgttaatgaacctaaacgaggagtcggtccg
ggggcattagaaaaattacgtcgttttgctgacagtcgtggactttctttagcagattca
agttttgatattatgttatccgatattcgtggaaaagcggctggtgagatttataatttg
gcaatggcctttgatttgttgagaacccatagtgaaagttcaacaatcacagaattagtt
gaagaaatgttagagcgtactggctatgtcaaagctttgcaaatgatgccaagtatcgaa
aatcaagcacgaattgaaaatattgaagaattcttgtcagtaactaaagggtttgatgaa
aaatcagaaattcctctagatgaagaaacgggagagccaattgttgaaactggattagat
aagttgagccgtttccttaacgaagttagtttgctttctgaaacagatgcttatgaggaa
gaatctgaccaagtaacaatgatgaccctgcatgcggcaaaaggtttggaatttccaatt
gttttcttaattggaatggaagaaaacatttttcctttatcacgggtaaatgaagatatt
gatgagttggaagaagaacgtcgtttggcttatgttggaattacacgggcagaagaaacg
ctctacttaatgaatgccaatcaacgtgtgctttatggtaaaacgaattataatcgtccc
agccgttttatttcggaaattgatgatgaattactagaatatgctgggattgctcgtaaa
gcaaattcaagcttcaatgcttcttataaatctggtggttttgccagtgggatctcgatg
tcagatgcgcttcatcaaagaaaagcagtcattaatccaactgcagctcaagcgacgatt
aataattctgaaacagaagattggcaaattggcgatacagcgattcaccgtaaatggggc
gaaggtatggtattaggaatttctggttctggtaaaaatatggaactcaagattaatttc
ccagaagtcggaatgaaacgtttattagcagcaatggctccaattgagaaaaaatag
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