Lactococcus lactis subsp. lactis NCDO 2118: NCDO2118_1915
Help
Entry
NCDO2118_1915 CDS
T03437
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
llx
Lactococcus lactis subsp. lactis NCDO 2118
Pathway
llx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCDO2118_1915 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llx03019
]
NCDO2118_1915 (recQ)
03400 DNA repair and recombination proteins [BR:
llx03400
]
NCDO2118_1915 (recQ)
Enzymes [BR:
llx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCDO2118_1915 (recQ)
Messenger RNA biogenesis [BR:
llx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCDO2118_1915 (recQ)
DNA repair and recombination proteins [BR:
llx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCDO2118_1915 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
MC4
Motif
Other DBs
NCBI-ProteinID:
AII13370
LinkDB
All DBs
Position
2058440..2060218
Genome browser
AA seq
592 aa
AA seq
DB search
MNLEAKLKEIFGYDNFRNGQKQIIEQVLDGQATLGILPTGAGKSICYQLPALIQPGLTLV
ISPLISLMKDQVDQLNIAGIPATFINSTLEDSESYQRMRQVENGEIKLLFVAPERFSLDY
FNAFLQKLPIDLVAIDEAHCISQWGHDFRPSYVDFASHLQYLPTNPTVLALTATATPKVA
DDIQKLLSISPSHTIKTGFLRENLRFEVVKGMDKRTFLKNYLKNQESEAAGIIYASTRKE
VEEICEWLNHNHFKAVRYHAGLSEQERQINQELFLFDEVPIMVATNAFGMGINKPNVRFV
IHYALPATIESYYQEAGRAGRDGLESDAILLFSPNDLRIRNFLIEQGEGDEAHKEHEYEK
LRQMQAYTSAETCLQRYILQYFGDEGEDCKKCSNCLDERELLDITIDAQKVLSCVVRMGE
RFGKTAVAQVLIGSKNKNIAKWNFESLSTFGIMKNHSQKTVGELIDFLSAESYLNITSGK
FPLLLISAQGLKVLKGQIKVYRKASLIIESKTKISHHFDEECFASIRALRLELAKEEGVP
PFMIFSDSALKEMAQVLPDSPSQFLQISGVGPVKLEKYGRLFIDKISEYKKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagctaaattaaaagaaatttttggttatgacaatttccgaaatggtcag
aaacaaattattgaacaagtcctagatggacaagccactcttggtattttacccacagga
gctggaaaatcaatctgctatcagttaccagctcttattcaaccaggtcttactctcgta
atctccccacttattagcttgatgaaagatcaagtcgaccagctgaatattgccggaatt
ccagcaacatttattaactctaccttagaggattccgaatcttatcaaagaatgcgacag
gttgaaaatggcgaaatcaagcttctttttgtagcaccagagcgtttttcattagactat
ttcaatgcctttttacaaaaacttccaattgatttagttgccatagacgaagcacactgt
atttcacaatgggggcacgatttcagacccagttatgtcgattttgcctctcatctccaa
tatttaccaacaaatcctaccgtcttagcccttacggctactgcgacaccaaaagttgca
gatgatattcaaaaacttctttcaatttcccccagtcatactattaaaaccggttttctt
agagaaaacttacgttttgaagtagtcaaagggatggataagagaacttttcttaaaaat
tatcttaaaaatcaagaaagtgaggctgctggaattatctatgccagcactcgtaaagaa
gttgaagaaatttgtgaatggctcaaccataatcatttcaaagccgttcgttaccatgct
ggactgagcgaacaggaacgtcaaataaatcaagaactttttctctttgacgaagtaccg
ataatggttgccactaatgcttttggcatgggaatcaataaaccaaatgttcgatttgtg
attcattatgcccttcccgcaacaattgaaagttattatcaagaagctgggcgagcagga
cgggacgggcttgaatctgatgctatcctccttttttcaccaaatgatttacgaattcgt
aatttcttgattgagcaaggtgaaggtgatgaagcgcacaaggaacatgaatacgaaaag
cttcgacaaatgcaagcatacacaagtgccgaaacctgtttgcaacgctatatcttgcaa
tattttggtgatgaaggtgaagattgtaaaaagtgtagtaattgtcttgatgaaagagaa
cttctcgatattacaattgatgctcaaaaagtcctatcttgtgtcgtccgaatgggtgaa
cgttttggtaagacggccgtagcacaagttttgattggttctaaaaataaaaatattgca
aaatggaattttgaatctctatcgacttttggaattatgaaaaaccattcccaaaaaacc
gtgggtgaattaatcgattttctatctgctgaaagttatttaaacattacatcaggtaaa
ttcccacttctccttatttcagcccaaggattaaaagtcctcaaaggacaaatcaaagtt
tatcgcaaagctagcttaattattgaatcgaaaacaaaaatctctcatcattttgatgaa
gaatgttttgcaagtattcgtgcacttcgacttgaactagccaaggaagaaggcgtccct
cctttcatgattttttctgatagtgcccttaaagaaatggctcaagttctgccggatagt
ccaagtcaatttttacaaatttctggtgtcggacctgttaaactcgaaaaatatggaagg
ctttttatcgacaaaatatctgaatataaaaaaagctga
DBGET
integrated database retrieval system
